Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq18 226 4e-54 seq39 140 4e-28 seq6 87.8 2e-12 seq30 86.0 8e-12 seq21 86.0 8e-12 seq1 86.0 8e-12 >seq18 Length=654792 Score = 226 bits (250), Expect = 4e-54 Identities = 268/358 (75%), Gaps = 4/358 (1%) Strand=Plus/Plus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 |||||||||||||||||||||||| ||||| || || || || |||||||| |||||||| Sbjct 485742 ATCGAAATCTTCACCACCCAAGTGGGTATCACCGGCAGTAGCCTTGACTTCGAAGATACC 485801 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 | | |||||| | | | || ||||| || || || ||||| || || ||||| | || Sbjct 485802 TTCCTCAATGGTGAGAAGTGAGACATCGAAAGTTCCTCCACCGAGATCGAAAATCAAAAC 485861 Query 7576 GTT-CGTATCGTC-GTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633 || ||| ||| | ||| ||||| |||||||| || || || || || || || || Sbjct 485862 ATTGCGT-TCGCCAGTC-ACCTTCTTGTCGAGACCATAAGCAATGGCAGCAGCTGTGGGC 485919 Query 7634 TCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGT 7693 ||||| || ||||||||| ||||| |||| ||| || | || || || |||||||| Sbjct 485920 TCATTGATGATACGAAGAACGTTCAATCCAGAAATGGTACCGGCGTCCTTGGTCGCTTGA 485979 Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCG 7753 || || ||||| || |||||||| ||||| || ||||| |||| | || || | ||| Sbjct 485980 CGCTGGGAATCATTGAAGTAGGCGGGGACAGTAACGACAGCGTTGGATACGGTCGTTCCG 486039 Query 7754 AGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAG 7811 || || ||||| || | |||||||| ||| || ||||| || ||||| ||||||| Sbjct 486040 AGGTAAGATTCAGCAGTCTCTTTCATCTTGAGGAGTACCATGGACGAAATTTCTTCAG 486097 Score = 147 bits (162), Expect = 3e-30 Identities = 263/384 (68%), Gaps = 0/384 (0%) Strand=Plus/Plus Query 7022 ATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTC 7081 || || || || || | || || || || || |||||||| ||||| || | || || Sbjct 485258 ATAGCAGCCTGAACAGCGGCTCCATAAGCAACGGCCTCATCAGGGTTGATGCTCTTGTTA 485317 Query 7082 AGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGAT 7141 | ||||| |||||||| | || || | | | || ||||| || || || Sbjct 485318 GGCTCTTTGCCGTTAAAGAAGTCGGACACAAGCTTAACGATACGAGGGATACGAGTGGAA 485377 Query 7142 CCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTT 7201 |||||||| | ||| || || | || || || || || ||||| ||||| || || Sbjct 485378 CCACCGACAAGAACAATCTCGTGAACATTGGACTTGTCAATCTTGGAGTCACGTAGAACC 485437 Query 7202 TTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCA 7261 || ||||| ||||| | |||||| | ||| ||||| || ||||| || || Sbjct 485438 TTCTCGACCGGTTCAAGCGTGCCACGGAAAAGGTCTTGACACAACTCTTCAAATCGAGCT 485497 Query 7262 CGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTT 7321 ||||||| ||| || |||||||| | ||| ||||| | ||| ||||||||||||| ||| Sbjct 485498 CGGGTAAGGGAAGTGTAGAAATCGATGCCCTCGTAAAGCGAGTCAATTTCAATGGATGTC 485557 Query 7322 TGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGG 7381 || || | || || | || || || || ||||| || || || || | |||||||| Sbjct 485558 TGAGCGGCAGAGGAAAGGGTGCGTTTGGCACGCTCGCAAGCGGTACGCAGACGACGAACA 485617 Query 7382 GCACGCGGGTTACCGGAAATATCT 7405 ||||| ||||| ||| | |||| Sbjct 485618 GCACGAGGGTTCGAGGACAGATCT 485641 Score = 86.0 bits (94), Expect = 8e-12 Identities = 96/128 (75%), Gaps = 3/128 (2%) Strand=Plus/Plus Query 7988 TGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGAT 8047 || || || || || || ||||| ||||| ||| | | | | || | ||| || || Sbjct 486377 TGATTTTTTGCGGCATCGCCGATGAGACGCTCACTGTCT---GAGAAGGAGACATAGGAA 486433 Query 8048 GGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACG 8107 ||||| || ||||| || |||||||| || || || || ||||| ||||||||||||||| Sbjct 486434 GGGGTGGTGCGATTACCCTGGTCGTTGGCGATGATCTCAACGCGATCGTTTTGCCAGACG 486493 Query 8108 CCGACGCA 8115 ||||| || Sbjct 486494 CCGACACA 486501 >seq39 Length=420478 Score = 140 bits (154), Expect = 4e-28 Identities = 270/389 (69%), Gaps = 12/389 (3%) Strand=Plus/Minus Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399 || ||||| || |||||||| || | | | ||| | |||||||| | || ||||| Sbjct 213006 GTGCGCTTGGCACGCTCACAAGCGCTCCTGAGACGCCTGAGGGCACGGGCGTCGTCGGAA 212947 Query 7400 ATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTG-TCGAAG-GAGTCTCGAAT 7457 ||||| ||| || || || || || | |||||| || ||| | | | | | Sbjct 212946 ATATCAAGCTTGGTCTTGCGCTTGAATTCGTTCTTGAAGTGCTCCAAGAGCGCATTG--T 212889 Query 7458 CGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTC 7517 |||| || |||||||| | || ||||| ||||| || || ||||| | |||| ||| | Sbjct 212888 CGAAGTCCTCACCACCAAGATGGGTATCACCCGCAGTTGCCTTGACAGCGAAGACACCAC 212829 Query 7518 CTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGT 7577 | ||||| || | || ||||| || || || || || || || |||||||| |||| Sbjct 212828 CACTGATGTTCAAGAGGGAGACATCGAAAGTTCCTCCTCCAAGATCGAAAATGAGGACGT 212769 Query 7578 TCGTATCGTCGTCTTTGTTCTTA---TCGAGACCGTACGCGATAGCCGCCGCCGTTGGTT 7634 || | || | | ||||| | | || ||||| || || || || || || || |||| Sbjct 212768 TCTTCTCAGCTT--TTGTT-TGACGGTCAAGACCATAGGCAATGGCGGCAGCGGTAGGTT 212712 Query 7635 CATTAATAATACGAAG-ACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGT 7693 | ||||| |||||||| ||| | ||||||||||| | | |||||||| || || | Sbjct 212711 CGTTAATGATACGAAGGACA-TCAAGGCCAGCAATGGCACCAGCATCTTTGGTGGCCAGA 212653 Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGAC 7722 || || |||||||| ||||| || || || Sbjct 212652 CGCTGAGAATCGTTGAAGTATGCGGGAAC 212624 >seq6 Length=1303705 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/200 (71%), Gaps = 2/200 (1%) Strand=Plus/Plus Query 7482 TATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACAT 7541 |||| || || || || |||||||||||||||||| | |||||| | | | || |||| Sbjct 1135526 TATCACCGGCAGTAGCCTTGACTTCAAAGATACCTTCCTCAATGGTGAGAAGTGAGACAT 1135585 Query 7542 CAAACGTACCACCACCCAGGTCAAAAATGAGTACGTT-CGTATCGTCGTCTTTGTTCTTA 7600 | || || || ||||| || || ||||| | || || ||| | ||| ||||| Sbjct 1135586 CGAAAGTTCCTCCACCAAGATCGAAAATCAAAACATTGCGTTTGCCAGTC-ACCTTCTTG 1135644 Query 7601 TCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGG 7660 || ||||| || || || || || || || || ||||| || |||| |||| |||| Sbjct 1135645 TCAAGACCATAAGCAATGGCAGCAGCTGTGGGCTCATTGATGATACAAAGAACATTCAAT 1135704 Query 7661 CCAGCAATAGTTGCCGCATC 7680 |||| ||| || | ||||| Sbjct 1135705 CCAGAAATGGTACCGGCATC 1135724 >seq30 Length=651819 Score = 86.0 bits (94), Expect = 8e-12 Identities = 173/256 (68%), Gaps = 3/256 (1%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||||||||||||||| | || || || || || || || ||| || |||| ||| Sbjct 180251 TCGAAATCTTCACCACCGAGATGAGTGTCTCCGGCAGTGGCCAAGACCTCGAAGACACCG 180192 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | || || | | || |||||||| || || || || || || | | | | Sbjct 180191 TCATCGATAGAAAGGAGAGAGACATCAAAGGTTCCTCCTCCGAGATCGTAGACAATGATC 180132 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 | | || | | || || ||| || ||||| |||||||| || || || |||||| Sbjct 180131 TGGGATTCACCAGCCTTCTTGTTA---AGTCCGTAGGCGATAGCGGCGGCAGTGGGTTCA 180075 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 ||||| ||||||||| | || ||||| ||||| | ||||| || || || || ||| Sbjct 180074 TTAATGATACGAAGAACCTGGAGACCAGCGATAGTGCCAGCATCCTTGGTAGCCTGACGT 180015 Query 7697 TGCGAATCGTTAAAGT 7712 || | ||||| |||| Sbjct 180014 TGAGCGTCGTTGAAGT 179999 >seq21 Length=1130388 Score = 86.0 bits (94), Expect = 8e-12 Identities = 161/234 (69%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 105838 CCAATACCCCCAGCCCACTTACTGATACGCGCACACTCTTTTACTGTATCGTAAATACCG 105897 |||||||| ||||| ||| || || ||||||| || | ||||| || ||||| Sbjct 174769 CCAATACCTCCAGCAGTCTTGCTAATCATGGCACACTGCTTGAGGGTATCATAGATACCA 174710 Query 105898 TCGATACTATCTTCCTTATTCGCAATCAGGAAACACGATGACATTTGTGGTCTGGGTGTA 105957 ||||| ||| ||||| | | ||||||||||| | |||||| ||||||| Sbjct 174709 TCGATTGAATCGTCCTTCATACAGACAAGGAAACACGAGCTAAGTTGTGGGTGGGGTGTA 174650 Query 105958 CCAGCATTGAACAGAGTTGGTGTTGCATGAATGAACAAACCTTTCGATA-ACGCTTCGTA 106016 || |||||||| || || || | ||||| |||| | | | || | | | || || Sbjct 174649 CCGGCATTGAAGAGTGTAGGCGAGGCATGTGTGAAGTAGCGCTCAGACATAAGGTT-ATA 174591 Query 106017 TGTTTCCAGGACGTGATCAATATCGTGTCCATGAATACCAATAGCGACGCGCAT 106070 || || |||||| ||||||| || | |||||||| |||| || || ||||| Sbjct 174590 CGTCTCGAGGACGCGATCAATGTCATCACCATGAATGCCAACCGCAACACGCAT 174537 >seq1 Length=1986796 Score = 86.0 bits (94), Expect = 8e-12 Identities = 98/130 (75%), Gaps = 4/130 (3%) Strand=Plus/Minus Query 7607 CCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCA 7666 ||||| || | || || || || || || ||||| | ||||||| || ||| || ||| Sbjct 1137060 CCGTAGGCCAAGGCAGCGGCAGTCGGCTCGTTAATCACACGAAGAACGTCCAGACCCGCA 1137001 Query 7667 ATAGTTGCC--GCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCG 7724 || ||| | ||||| || || ||||||||||| | |||||| |||||||| || || | Sbjct 1137000 AT--TTGACCGGCATCCTTGGTGGCTTGTCGTTGGGCATCGTTGAAGTAGGCAGGCACGG 1136943 Query 7725 TTACGACCGC 7734 ||||||| || Sbjct 1136942 TTACGACAGC 1136933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635118890591680