Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq3 113 6e-20 seq2 86.0 8e-12 >seq3 Length=1746238 Score = 113 bits (124), Expect = 6e-20 Identities = 283/418 (68%), Gaps = 18/418 (4%) Strand=Plus/Minus Query 101905 TGGCATTCTTTGCTGGGTCCGATGGAATTGTTTTTGAGAA---TATCAATAACAACTTTG 101961 |||| || ||||||| |||||||| || || || || | || | || |||| Sbjct 1247644 TGGCCTTTTTTGCTGCTTCCGATGGCATCGTCAACGAAAACCTTGTCGA--ACG-CTTTT 1247588 Query 101962 CTGATGAGGTGCAATCCTCTGAAGCGAGATCTTTCTATGCGTATCAATGTCATAATG-AA 102020 | | || || || || ||||||| | | ||||||| | |||| |||| ||| || Sbjct 1247587 CCAACGAAGTTCAGGCCGCTGAAGCTCGCTGCTTCTATGGTTTTCAAA-TCATGATGGAA 1247529 Query 102021 ATGGTGCATGGGGAGACATACAGTAAACTCATAGACAAGTATATTAAGGATGGTGCTGAG 102080 | | ||| || || ||| | |||||||||| || || ||||| ||||| Sbjct 1247528 AACATTCATTCCGAAACGTACTCTCTCCTCATAGACACTTACATCAAGGACCAAGCTGAA 1247469 Query 102081 AAGAAGCAGCTCTTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAG-CGGATTG 102139 || | || ||||| |||||| | || | || ||||| ||| | ||| | || || Sbjct 1247468 CGCGAGTATCTTTTTGATGCCATCGAGACCATCCCCTGTAT-CAAGCGTAAGGCTGAATG 1247410 Query 102140 GGCTATGAAGTGGTT---TGATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATT 102196 ||| | |||||| | ||| | || || | | || || || ||| | ||||||| Sbjct 1247409 GGCCCTCAAGTGGATATCTGACAAGAACTC---TACATTCGCCGAACGATTGGTCGCATT 1247353 Query 102197 TGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-CTATTTATTGGCTCAAGA 102255 ||| ||| || || |||||||| || || ||||| ||| | || | ||||||||||| Sbjct 1247352 TGCAGCTGTGGAAGGCATCTTCTTTTCAGGCTCCTT-TGCATCAATCTTTTGGCTCAAGA 1247294 Query 102256 AGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGG 102313 |||| ||||| ||||| || | |||||| || ||||||||| |||||| ||||| Sbjct 1247293 AGCGTGGTCTGATGCCTGGCTTAACCTTCTCAAATGAGCTTATCAGTCGTGATGAGGG 1247236 >seq2 Length=1435055 Score = 86.0 bits (94), Expect = 8e-12 Identities = 118/164 (72%), Gaps = 6/164 (4%) Strand=Plus/Plus Query 176891 GCATCACGAACATTCTTACACTTCCCACGAAGAGGGAAGACACCGTAGTGATCGCGACCA 176950 || || ||||||||| ||| ||||| ||||||||||||||| | | ||| | ||| Sbjct 199938 GCTTCGCGAACATTCAATAGCTTGCCACGGAGAGGGAAGACACCGAAATAATCCCTTCCA 199997 Query 176951 ACCACAGAGAGACCCGCAACCGCGAGCGTTTTCGCAGAATCACCCTCTGTCACGATGAGT 177010 || || ||| ||||| || || || | ||| ||||| || || ||||||| || || Sbjct 199998 ACAACGCCGAGGCCCGCGACAGCAAGAGCTTTGGCAGAGTCTCCTTCTGTCAAAATCAGA 200057 Query 177011 GTACA---CTTGCCAGATTGTGCCGTACCCGCCTTGTTCGCATC 177051 ||||| ||| ||| ||| ||||||||| || || || || Sbjct 200058 GTACAATCCTTCCCATATT---TCGTACCCGCGTTATTGGCGTC 200098 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620728805741440