Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq3 113 5e-20 seq2 98.7 1e-15 seq21 82.4 9e-11 >seq3 Length=1746238 Score = 113 bits (124), Expect = 5e-20 Identities = 341/515 (66%), Gaps = 19/515 (4%) Strand=Plus/Plus Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344 ||| | ||||||||| || ||||| |||||||||||| || ||| ||||| ||||| Sbjct 1247229 GTGCATACCCTCATCACGACTGATAAGCTCATTTGAGAAGGTTAAGCCAGGCATCAGACC 1247288 Query 117345 CCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATACCCTCCACAC 117403 |||||||| | |||| | || | ||| || || || || |||||||| || |||||| Sbjct 1247289 ACGCTTCTTGAGCCAAAAGATTGATGCA-AAGGAGCCTGAAAAGAAGATGCCTTCCACAG 1247347 Query 117404 ACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCA---AACCATTTCA 117460 ||||| || | | || |||||||| | ||| || ||||| | ||| || | Sbjct 1247348 CTGCAAATGCGACCAATCGTTCGGCGAATG---TAGAGTTCTTGTCAGATATCCACTTGA 1247404 Query 117461 TTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAACTGCT 117520 ||||||| ||||| || ||||| || | || | |||||| ||||| | | || Sbjct 1247405 GGGCCCATTCAGCCTTACGCTTGATACAGGGGATGGTCTCGATGGCATCAAAAAGATACT 1247464 Query 117521 TCTTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTCGCCATGAA 117580 ||||| | ||||| ||||| |||| || | || || |||||| ||||| Sbjct 1247465 CGCGTTCAGCTTGGTCCTTGATGTAAGTGTCTATGAGGAGAGAGTACGTTTCGGAATGAA 1247524 Query 117581 CCATTT-CATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTATCTGCACTTCA 117639 ||| ||| || | |||| | | ||||| |||| ||||| ||| ||||| Sbjct 1247525 TGTTTTCCATCAT-GATTTGAAAACCATAGAAGCAGCGAGCTTCAGCGGCCTGAACTTCG 1247583 Query 117640 TCCGCAAAATTGTTATTGATA---TTCTCAAAAACAATTCCATCGGACCCAGCAAAGAAT 117696 | | |||| || | || | || || || || |||||||| ||||||| || Sbjct 1247584 T-TGGAAAAGCGT--TCGACAAGGTTTTCGTTGACGATGCCATCGGAAGCAGCAAAAAAG 1247640 Query 117697 GCCAGGATGTACTTTATGAATTTCTTTTCATTTTCATTCAGG-GT--CTTCCAGTCGTCA 117753 |||| | | | || || | ||||| ||||| ||| || ||||| |||| Sbjct 1247641 GCCAAAACATGCGAGATAAAGTGGCGCTCATTGTCATTGAGGCGTTCATTCCAATCGTAT 1247700 Query 117754 AGATCTTTGGACAAATCAACTTCTTCCGCAGTCCA 117788 | |||||||| | ||| | || || || ||||| Sbjct 1247701 ATGTCTTTGGAAAGATCCATCTCCTCGGCCGTCCA 1247735 Score = 87.8 bits (96), Expect = 2e-12 Identities = 286/438 (65%), Gaps = 10/438 (2%) Strand=Plus/Minus Query 117274 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCT 117333 ||||| ||| ||| || ||||| || ||| || |||||||| ||||| || || Sbjct 1249473 GCAAAATCCGTGTGAAGGCCCTCGTCGCGGCTGATGAGTTCATTGGAGAACGTAAGACCA 1249414 Query 117334 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGAT 117392 ||||| | ||||||||||| | ||| | ||||| ||| || ||||| ||||| ||||| Sbjct 1249413 GGCATTAATCCCCGCTTCTTGATCCAGAAGATAGCAGCA-AAAGACCCAGAGAAAAAGAT 1249355 Query 117393 ACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTC--- 117449 || || ||| || || |||| || || || || || | | |||| | || Sbjct 1249354 CCCTTCTACAGCGGCGAAAGCAACGAGTCGTTCAGCAAAAGTG---GACTGTTGATCCGA 1249298 Query 117450 AAACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTC 117509 | |||| | | ||||| | || || || || ||||| | |||| |||||| || Sbjct 1249297 TATCCATCTGAGAGCCCAATCAGCTTTACGCTTAACACATGAGATGGTTTCGATGGCGTC 1249238 Query 117510 AAATAACTGCTTCTTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGT 117569 || | || | ||| | |||||| ||||| | || || | | || || || Sbjct 1249237 GAAAAGATGTGTGCGTTCTTCTGGATCCTTGATGTAGGTATCGATAAGTAAAGAGTACGT 1249178 Query 117570 TTCGCCATGAACCATTT-CATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTA 117628 ||| ||||| ||| ||| || ||| | ||||||| | || || || || Sbjct 1249177 TTCCGAGTGAACATTTTCCATCAT-AATTTGGAAGCCGTAGAAGCAACGTGCCTCAGCTA 1249119 Query 117629 TCTGCACTTCATCCGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAG 117688 |||| | |||| | ||| | | | || ||||||| || || || ||||| ||| Sbjct 1249118 TCTGTATTTCACTAGAAAACCTCTCAAGGAGATTCTCATTCACGATGCCGTCGGAAGCAG 1249059 Query 117689 CAAAGAATGCCAGGATGT 117706 |||| ||||| |||| || Sbjct 1249058 CAAAAAATGCGAGGACGT 1249041 >seq2 Length=1435055 Score = 98.7 bits (108), Expect = 1e-15 Identities = 201/295 (68%), Gaps = 14/295 (5%) Strand=Plus/Plus Query 169214 ATCTGTCATAATCATAAGACGACCATAGCGAAGTTCAGAAACATCT--TGG--TAGTCTT 169269 ||| ||||||||||||||||||||||| || | || || || | | | ||||||| Sbjct 199811 ATCCGTCATAATCATAAGACGACCATATCGCA----AGGAAGATGTATTCGAATAGTCTT 199866 Query 169270 TTCCTTGTTGAAGACCCAAGATCTTCTTGAGATCGTTGAACTCTTGGTTTGATGTGAGCT 169329 | || || || |||| ||| || |||| || | | || | ||| ||| | Sbjct 199867 TGTTATGCTGCAGGCCCATGATTTTTTTGATATTCTGAATTTCCTCGTTCTTCATGATTT 199926 Query 169330 GTGCCACTGAAGCGTCGCGGACATTCTTACACTTCCCACGGAGAGGAAAGACGCCATAGT 169389 | | | || ||||| |||||| ||| ||||||||||| ||||| || | | Sbjct 199927 GGTCATGTCTTGCTTCGCGAACATTCAATAGCTTGCCACGGAGAGGGAAGACACCGAAAT 199986 Query 169390 GATCACGTCCAACGACGGAGAGACCCGCGACCGCAAGGGTTTTCGCTGAATCACCCTCCG 169449 ||| | |||||| ||| ||| |||||||| ||||| | ||| || || || || || | Sbjct 199987 AATCCCTTCCAACAACGCCGAGGCCCGCGACAGCAAGAGCTTTGGCAGAGTCTCCTTCTG 200046 Query 169450 TGACAATGAGGGTACA---CTTTCCAGATTGCGCCGTACCCGCCTTGTTTGCGTC 169501 | | ||| || ||||| ||| ||| ||| ||||||||| || || ||||| Sbjct 200047 TCAAAATCAGAGTACAATCCTTCCCATATT---TCGTACCCGCGTTATTGGCGTC 200098 >seq21 Length=1130388 Score = 82.4 bits (90), Expect = 9e-11 Identities = 174/260 (67%), Gaps = 0/260 (0%) Strand=Plus/Minus Query 107051 TGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTT 107110 ||||||| | |||||||| ||||| ||| || ||||||| | | || || Sbjct 174781 TGGATGTTGAGGCCAATACCTCCAGCAGTCTTGCTAATCATGGCACACTGCTTGAGGGTA 174722 Query 107111 CCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGC 107170 |||||||||| | |||||| || ||||| | || |||||| || | | || Sbjct 174721 TCATAGATACCATCGATTGAATCGTCCTTCATACAGACAAGGAAACACGAGCTAAGTTGT 174662 Query 107171 GGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGAC 107230 || |||||||| ||||||||||| || || | || || |||| | | ||| Sbjct 174661 GGGTGGGGTGTACCGGCATTGAAGAGTGTAGGCGAGGCATGTGTGAAGTAGCGCTCAGAC 174602 Query 107231 ATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACA 107290 || || || ||||| | ||| ||||||||| || || || ||||| | || ||| Sbjct 174601 ATAAGGTTATACGTCTCGAGGACGCGATCAATGTCATCACCATGAATGCCAACCGCAACA 174542 Query 107291 CGCATAAACATGTATTGGGG 107310 ||||| | ||||| ||| || Sbjct 174541 CGCATGATCATGTGTTGAGG 174522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589967879420480