Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq1 168 1e-36 seq2 149 1e-30 >seq1 Length=1986796 Score = 168 bits (186), Expect = 1e-36 Identities = 162/208 (78%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 194933 CAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGA 194992 |||| || || ||||||||||| ||||||||||| || | || || | |||||||||| Sbjct 634527 CAAGATGGAGGGTGGACTCTTTCTGAATATTGTAGTCTGAGAGGGTGCGACCATCTTCGA 634586 Query 194993 GCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAA 195052 ||||||| || |||||||| | || ||||| || ||||| |||||||| ||||| || | Sbjct 634587 GCTGCTTCCCGGCGAAGATCAAGCGCTGTTGATCGGGAGGGATGCCTTCCTTGTCCTGGA 634646 Query 195053 TTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTC 195112 |||| ||||||||| |||||||| || || || || || || |||| ||||||| Sbjct 634647 TTTTGGCCTTGACGTTATCAATGGTATCGGACGACTCGACCTCGAGAGTAATGGTCTTTC 634706 Query 195113 CTGTCAAAGTTTTTACGAACACTTGCAT 195140 | |||||||| || || || | |||||| Sbjct 634707 CGGTCAAAGTCTTGACAAAGATTTGCAT 634734 Score = 152 bits (168), Expect = 1e-31 Identities = 159/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194933 CAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGA 194992 |||| ||||| ||||| || || ||||||||||| || | ||| || | || ||||| | Sbjct 634820 CAAGATGAAGGGTGGATTCCTTCTGAATATTGTAGTCTGAAAGTGTGCGACCGTCTTCAA 634879 Query 194993 GCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAA 195052 | ||||| || || ||||| | || |||||||| || || || ||||| |||||||| | Sbjct 634880 GTTGCTTGCCGGCAAAGATCAAACGCTGTTGGTCGGGGGGGATCCCTTCCTTGTCTTGGA 634939 Query 195053 TTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTC 195112 | || ||||| || |||||||| || ||| ||||| || ||||||| ||||| | Sbjct 634940 TCTTGGCTTTGACATTGTCAATGGTATCAGAAGACTCCACCTCCAGGGTAATGGTCTTGC 634999 Query 195113 CTGTCAAAGTTTTTACGAACACTTGCATT 195141 | |||||||| ||||| || | ||||||| Sbjct 635000 CAGTCAAAGTCTTTACAAAGATTTGCATT 635028 Score = 141 bits (156), Expect = 2e-28 Identities = 159/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987 || ||| || || || || |||||||| || || |||||||| | ||||| | || || Sbjct 634243 CAGAACGAGATGCAGCGTCGACTCTTTCTGGATGTTGTAATCAGACAGAGTGCGACCGTC 634302 Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047 ||| ||||| || || || ||||| | ||||||||||| ||||||||||| || ||||| Sbjct 634303 TTCAAGCTGTTTTCCGGCAAAGATCAAGCGTTGTTGGTCAGGAGGAATGCCCTCCTTGTC 634362 Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107 || ||||| |||||| || ||||| ||||| ||| ||| || || || || | || Sbjct 634363 CTGGATTTTCGCCTTGACATTATCAATCGTGTCGGAAGATTCAACCTCGAGCGTGATGGT 634422 Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| || |||| || || || || | |||||| Sbjct 634423 CTTGCCCGTCAGCGTCTTGACAAAAATTTGCAT 634455 Score = 84.2 bits (92), Expect = 5e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| | ||||| || || || || || || |||| ||| || | ||||||||| Sbjct 635047 ACAAGGTGCAAGGTGGATTCCTTCTGGATGTTATAGTCGGAAAGCGTGCGGCCATCTTCG 635106 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAAT 195035 ||||| ||||| |||||||| || || || ||||| ||||| || Sbjct 635107 AGCTGTTTACCAGCGAAGATGAGACGCTGCTGGTCAGGAGGTAT 635150 >seq2 Length=1435055 Score = 149 bits (164), Expect = 1e-30 Identities = 166/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 |||||| | | ||||||||||| || || || || ||||||||||| |||| ||||| Sbjct 394828 TCTGAGCCGAAGGACAAGGTGAAGTGTAGATTCCTTCTGAATATTGTAGTCGGAGAGAGT 394887 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | ||||| ||||| || || || ||||||||||| ||||||||||| ||||| ||||| Sbjct 394888 GCGGCCATCCTCGAGTTGTTTGCCAGCGAAGATAAGACGTTGTTGGTCAGGAGGGATGCC 394947 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 || || || ||||| || |||||| || |||||||| || || || || || || Sbjct 394948 CTCCTTATCCTGAATCTTCGCCTTGACATTGTCAATGGTATCTGATGACTCGACCTCGAG 395007 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | ||||| || || | ||| || ||||| | ||||| Sbjct 395008 AGTGATAGTCTTGCCAGTAAGAGTCTTGACGAAAATCTGCAT 395049 Score = 100 bits (110), Expect = 6e-16 Identities = 85/105 (81%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| || || ||||| |||||||| ||||| ||||| || | ||| ||||||||||| || Sbjct 395341 AACTAGATGGAGAGTAGACTCTTTCTGAATGTTGTAGTCAGAAAGCGTTCTCCCATCCTC 395400 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAAT 195035 | |||||| || ||||| ||||| |||||||| || || ||||| Sbjct 395401 TAACTGCTTCCCAGCGAAAATAAGGCGTTGTTGATCAGGGGGAAT 395445 Score = 84.2 bits (92), Expect = 5e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 195037 CCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCA 195096 || || ||||||||||| || |||||| || ||||||||||| ||| || |||||| Sbjct 395501 CCCTCCTTGTCTTGAATCTTAGCCTTGACATTATCAATGGTGTCTGAAGACTCGACTTCA 395560 Query 195097 AGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| | |||||||| || | || |||||||| | |||||| Sbjct 395561 AGGGTGATTGTCTTTCCGGTGAGGGTCTTTACGAAGATTTGCAT 395604 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109456694911784