Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq3 253 2e-62 >seq3 Length=1746238 Score = 253 bits (280), Expect = 2e-62 Identities = 396/566 (70%), Gaps = 3/566 (1%) Strand=Plus/Minus Query 18952 AACATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAA 19011 |||| || |||||||||||| || || |||||||| | || || | |||||| || Sbjct 1249485 AACAACAGACATGCAAAATCCGTGTGAAGGCCCTCGTCGCGGCTGATGAGTTCATTGGAG 1249426 Query 19012 AATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCA 19071 || || | ||||||||| | ||| | || || | |||||| |||| |||||| || ||| Sbjct 1249425 AACGTAAGACCAGGCATTAATCCCCGCTTCTTGATCCAGAAGATAGCAGCAAAAGACCCA 1249366 Query 19072 GAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCA 19131 || || || || |||||||| || || |||||||| |||| ||| || || | | | Sbjct 1249365 GAGAAAAAGATCCCTTCTACAGCGGCGAAAGCAACGAGTCGTTCAGCAAAAGTGGACTGT 1249306 Query 19132 TTATTATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCT 19191 | || |||||| | || ||||||||||| || || ||||||| || || || Sbjct 1249305 TGATCCGATATCCATCTGAGAGCCCAATCAGCTTTACGCTTAACACATGAGATGGTTTCG 1249246 Query 19192 ATAGAATTAAATAGATACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAA 19251 || | | || |||| | || || |||| ||| || | || | ||| || | |||| Sbjct 1249245 ATGGCGTCGAAAAGATGTGTGCGTTCTTCTGGATCCTTGATGTAGGTATCGATAAGTAAA 1249186 Query 19252 CTGTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCT 19311 |||| |||| || |||| |||||| || || || || ||||| || || | ||| Sbjct 1249185 GAGTACGTTTCCGAGTGAACATTTTCCATCATAATTTGGAAGCCGTAGAAGCAACGTGCC 1249126 Query 19312 TCTGTTATCTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCA 19371 || | |||||||| ||||||| |||| || || | | ||| ||||| || || || || Sbjct 1249125 TCAGCTATCTGTATTTCACTAGAAAACCTCTCAAGGAGATTCTCATTCACGATGCCGTCG 1249066 Query 19372 CTAGCTGCAAAAAATGCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAATGTA 19431 ||| ||||||||||| | || || ||| |||| | ||| | ||| | | | || Sbjct 1249065 GAAGCAGCAAAAAATGCGAGGACGTGGGAAATGAAATATCGTTCGTTGGAGTTAAGTTTA 1249006 Query 19432 ---TTCCAATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCC 19488 |||||||| | | ||| | | | | ||||| |||||| |||||||||| || ||| Sbjct 1249005 TAGTTCCAATCCATGAGATCATGACAGAGATCTATTTCTTCGGCTGTCCAAAATGATGCC 1248946 Query 19489 TCTGCTTTTTTATACATGTTCCATAT 19514 | ||| | |||||| | |||||||| Sbjct 1248945 TGTGCCTGTTTATAAAAATTCCATAT 1248920 Score = 194 bits (214), Expect = 2e-44 Identities = 373/547 (68%), Gaps = 10/547 (2%) Strand=Plus/Plus Query 18982 CCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCttttt 19041 ||||| || | ||| || | ||||| || || ||||| ||||||||||| || | || Sbjct 1247236 CCCTCATCACGACTGATAAGCTCATTTGAGAAGGTTAAGCCAGGCATCAGACCACGCTTC 1247295 Query 19042 tttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAA 19101 || | ||| || || || ||||| || || |||||||| || ||||| || |||||||| Sbjct 1247296 TTGAGCCAAAAGATTGATGCAAAGGAGCCTGAAAAGAAGATGCCTTCCACAGCTGCAAAT 1247355 Query 19102 GCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCATTTCAGTGCCCAATCA 19161 || || | || ||| | | ||| | || | | ||||| || || ||||| ||| Sbjct 1247356 GCGACCAATCGTTCGGCGAATGTAGAGTTCTTGTCAGATATCCACTTGAGGGCCCATTCA 1247415 Query 19162 GCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGATACATACGCTCATCT 19221 ||||| || | ||| || || ||||| || | || ||| |||||| || ||| || Sbjct 1247416 GCCTTACGCTTGATACAGGGGATGGTCTCGATGGCATCAAAAAGATACTCGCGTTCAGCT 1247475 Query 19222 GTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAATGAATATTTTCTATA 19281 || || | || | ||||| | | | |||| |||| |||||||| ||||| || Sbjct 1247476 TGGTCCTTGATGTAAGTGTCTATGAGGAGAGAGTACGTTTCGGAATGAATGTTTTCCATC 1247535 Query 19282 GCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACTTCACTACAAAATCTT 19341 || ||||| || || || || | ||||| | ||| ||||| | |||| | | Sbjct 1247536 ATGATTTGAAAACCATAGAAGCAGCGAGCTTCAGCGGCCTGAACTTCGTTGGAAAAGCGT 1247595 Query 19342 TCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATGCTAATACATGTTTA 19401 ||||| | ||||| || || || ||||| ||| |||||||| || || ||||| Sbjct 1247596 TCGACAAGGTTTTCGTTGACGATGCCATCGGAAGCAGCAAAAAAGGCCAAAACATGCGAG 1247655 Query 19402 ATAAAATG------TTTTTCATCTGAGGTTAATGTATTCCAATCATTAATATCTTTAGAT 19455 ||||| || || |||| ||||| | ||||||||| | || ||||| || Sbjct 1247656 ATAAAGTGGCGCTCATTGTCAT-TGAGG--CGTTCATTCCAATCGTATATGTCTTTGGAA 1247712 Query 19456 AAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATACATGTTCCATATA 19515 | ||| | || || | ||||| || || || ||||| ||||| ||||| | |||||| Sbjct 1247713 AGATCCATCTCCTCGGCCGTCCAGAAGGATGCTTCTGCCTTTTTGTACATCTGCCATATC 1247772 Query 19516 T-CACGA 19521 | ||||| Sbjct 1247773 TACACGA 1247779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562096489817280