Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq3 138 1e-27 >seq3 Length=1746238 Score = 138 bits (152), Expect = 1e-27 Identities = 280/416 (67%), Gaps = 0/416 (0%) Strand=Plus/Plus Query 37196 ACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttt 37255 ||| ||||| | ||| || | ||||| || |||||||| || ||||| | ||| | || Sbjct 1247235 ACCCTCATCACGACTGATAAGCTCATTTGAGAAGGTTAAGCCAGGCATCAGACCACGCTT 1247294 Query 37256 tttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAA 37315 || | |||||| |||| |||||| || || |||||||| || ||||| || |||||||| Sbjct 1247295 CTTGAGCCAAAAGATTGATGCAAAGGAGCCTGAAAAGAAGATGCCTTCCACAGCTGCAAA 1247354 Query 37316 TGCTACAAGACGTGTACCGAAAGTTGAACTATAATCAGAAATCCAtttttttGTCCAATC 37375 ||| || | ||| |||| || || | | ||||| ||||| || | ||| || Sbjct 1247355 TGCGACCAATCGTTCGGCGAATGTAGAGTTCTTGTCAGATATCCACTTGAGGGCCCATTC 1247414 Query 37376 TGCCTTTAATTTAACACATTCAATTGTTTCAATTGCTTTTAAGAGAAAGtttttttCTTC 37435 ||||| || | ||| || || || || || | || ||| | | ||| | Sbjct 1247415 AGCCTTACGCTTGATACAGGGGATGGTCTCGATGGCATCAAAAAGATACTCGCGTTCAGC 1247474 Query 37436 ACTATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAAT 37495 || | || ||||| || || || | | ||| |||| || ||||| ||||| || Sbjct 1247475 TTGGTCCTTGATGTAAGTGTCTATGAGGAGAGAGTACGTTTCGGAATGAATGTTTTCCAT 1247534 Query 37496 AGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCT 37555 || ||||||||||| || || | |||||||| ||||| ||||| |||| | Sbjct 1247535 CATGATTTGAAAACCATAGAAGCAGCGAGCTTCAGCGGCCTGAACTTCGTTGGAAAAGCG 1247594 Query 37556 CTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACAT 37611 | | | |||||| || || || ||||| ||| ||||| || || | ||||| Sbjct 1247595 TTCGACAAGGTTTTCGTTGACGATGCCATCGGAAGCAGCAAAAAAGGCCAAAACAT 1247650 Score = 138 bits (152), Expect = 1e-27 Identities = 366/557 (66%), Gaps = 9/557 (2%) Strand=Plus/Minus Query 37167 AACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAA 37226 ||||| | |||||||||||| || | || || || | || || | |||||| || Sbjct 1249485 AACAACAGACATGCAAAATCCGTGTGAAGGCCCTCGTCGCGGCTGATGAGTTCATTGGAG 1249426 Query 37227 AAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCA 37286 || || | || |||||||| || | || || ||||| || || || |||||||| ||| Sbjct 1249425 AACGTAAGACCAGGCATTAATCCCCGCTTCTTGATCCAGAAGATAGCAGCAAAAGACCCA 1249366 Query 37287 GAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTA 37346 || || || || ||||| || || || || || || || ||| | | ||||| || Sbjct 1249365 GAGAAAAAGATCCCTTCTACAGCGGCGAAAGCAACGAGTCGTTCAGCAAAAGTGGACTGT 1249306 Query 37347 TAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCA 37406 | ||| || |||||| | | |||||| || || ||||||||| || ||||| Sbjct 1249305 TGATCCGATATCCATCTGAGAGCCCAATCAGCTTTACGCTTAACACATGAGATGGTTTCG 1249246 Query 37407 ATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAA 37466 || || | || ||| | |||||| ||| | || || ||||| || |||||| Sbjct 1249245 ATGGCGTCGAAAAGATGTGTGCGTTCTTCTGGATCCTTGATGTAGGTATCGATAAGTAAA 1249186 Query 37467 CTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCT 37526 ||| |||| ||||||| |||||| || || || || || || || || | || Sbjct 1249185 GAGTACGTTTCCGAGTGAACATTTTCCATCATAATTTGGAAGCCGTAGAAGCAACGTGCC 1249126 Query 37527 TCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCA 37586 |||| || || | || || ||||||||| | | || ||||| || || || || Sbjct 1249125 TCAGCTATCTGTATTTCACTAGAAAACCTCTCAAGGAGATTCTCATTCACGATGCCGTCG 1249066 Query 37587 CTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCATTTGA--TAATT 37644 ||| ||||| || || || || | || |||| || | || || || ||| | Sbjct 1249065 GAAGCAGCAAAAAATGCGAGGACGTGGGAAATGAAATATCGT---TCGTTGGAGTTAAGT 1249009 Query 37645 TT----TTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAACTT 37700 || |||||||| | | ||| | | | ||| | ||| || | |||||||| | Sbjct 1249008 TTATAGTTCCAATCCATGAGATCATGACAGAGATCTATTTCTTCGGCTGTCCAAAATGAT 1248949 Query 37701 GCCAATGCACGTTTATA 37717 ||| ||| ||||||| Sbjct 1248948 GCCTGTGCCTGTTTATA 1248932 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592303828262080