Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq3 181 2e-40 >seq3 Length=1746238 Score = 181 bits (200), Expect = 2e-40 Identities = 382/568 (67%), Gaps = 9/568 (2%) Strand=Plus/Plus Query 48123 AGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGA 48182 |||| | || || ||||| |||||| || || || || ||||| ||| | || |||| Sbjct 1247207 AGAGAAGACAAGCGAAGTCGGTGTGCATACCCTCATCACGACTGATAAGCTCATTTGAGA 1247266 Query 48183 AGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAG 48242 || | |||||||| | || | || |||||||| || |||| || || ||||| | Sbjct 1247267 AGGTTAAGCCAGGCATCAGACCACGCTTCTTGAGCCAAAAGATTGATGCAAAGGAGCCTG 1247326 Query 48243 AGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCT 48302 | ||||||||||| ||||| || || || ||| | | || |||| | || ||||| Sbjct 1247327 AAAAGAAGATGCCTTCCACAGCTGCAAATGCGACCAATCGTTCGGCGAATGTAGAGTTCT 1247386 Query 48303 TGTCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTA 48362 |||| || ||||| || ||||| || ||||| |||||| || || || ||||| | Sbjct 1247387 TGTCAGATATCCACTTGAGGGCCCATTCAGCCTTACGCTTGATACAGGGGATGGTCTCGA 1247446 Query 48363 TGGCCCGGAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCT 48419 |||| || || | || || ||| || |||| | || || |||| || Sbjct 1247447 TGGCATCAAAAAGATACTCGCGTTCAGCTTGGTCCTTGATGTAAGTGTCTATGAGGAG-- 1247504 Query 48420 TTGCGTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGG 48479 | |||| | || || || | || || || ||| || || || |||||| | | Sbjct 1247505 -AGAGTACGTTTCGGAATGAATGTTTTCCATCATGATTTGAAAACCATAGAAGCAGCGAG 1247563 Query 48480 CCTCAAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCAT 48539 | ||| |||| ||||| |||| || | || | || || || ||||| || |||| Sbjct 1247564 CTTCAGCGGCCTGAACTTCGTTGGAAAAGCGTTCGACAAGGTTTTCGTTGACGATGCCAT 1247623 Query 48540 CTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGA--- 48596 | ||||||||||| ||||| | ||||| | || |||||||| |||| ||| Sbjct 1247624 CGGAAGCAGCAAAAAAGGCCAAAACATGCGAGATAAAGTGGCGCTCATTGTCATTGAGGC 1247683 Query 48597 GAGCATTCCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACG 48656 | ||||||| | | || ||||||| || |||| || || | ||||||||||| | Sbjct 1247684 GTTCATTCCAATCGTATATGTCTTTGGAAAGATCCATCTCCTCGGCCGTCCAGAAGGATG 1247743 Query 48657 CGAGTGCTTTTTTGTACATGCCCCATAT 48684 | ||| ||||||||||| |||||| Sbjct 1247744 CTTCTGCCTTTTTGTACATCTGCCATAT 1247771 Score = 174 bits (192), Expect = 3e-38 Identities = 314/459 (68%), Gaps = 0/459 (0%) Strand=Plus/Minus Query 48131 CAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGA 48190 || ||||| ||| |||| | ||| ||||| ||||||||||| | |||||||| ||| Sbjct 1249476 CATGCAAAATCCGTGTGAAGGCCCTCGTCGCGGCTGATGAGTTCATTGGAGAACGTAAGA 1249417 Query 48191 CCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAG 48250 |||||||| | |||| || |||| |||||| || || || ||||| |||||||| ||| Sbjct 1249416 CCAGGCATTAATCCCCGCTTCTTGATCCAGAAGATAGCAGCAAAAGACCCAGAGAAAAAG 1249357 Query 48251 ATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAG 48310 || || || || || ||||| || ||| | || | |||| | | | || || Sbjct 1249356 ATCCCTTCTACAGCGGCGAAAGCAACGAGTCGTTCAGCAAAAGTGGACTGTTGATCCGAT 1249297 Query 48311 ATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGG 48370 ||||| || ||||| || || || ||| | |||| || || || ||||| | Sbjct 1249296 ATCCATCTGAGAGCCCAATCAGCTTTACGCTTAACACATGAGATGGTTTCGATGGCGTCG 1249237 Query 48371 AAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATC 48430 || || | ||| || ||| ||| | |||||| || || | |||| | Sbjct 1249236 AAAAGATGTGTGCGTTCTTCTGGATCCTTGATGTAGGTATCGATAAGTAAAGAGTACGTT 1249177 Query 48431 TCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACC 48490 || ||||| ||||| || || || ||||| ||||||||| | |||||| | | Sbjct 1249176 TCCGAGTGAACATTTTCCATCATAATTTGGAAGCCGTAGAAGCAACGTGCCTCAGCTATC 1249117 Query 48491 TGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCA 48550 || | ||| | || || ||||| || ||||||||||| || || || || ||||||||| Sbjct 1249116 TGTATTTCACTAGAAAACCTCTCAAGGAGATTCTCATTCACGATGCCGTCGGAAGCAGCA 1249057 Query 48551 AAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTG 48589 || || || ||||| || || ||||| || |||||| Sbjct 1249056 AAAAATGCGAGGACGTGGGAAATGAAATATCGTTCGTTG 1249018 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931512399431680