Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq2 122 6e-22 seq18 105 4e-17 seq1 98.7 6e-15 seq39 96.9 2e-14 >seq2 Length=1435055 Score = 122 bits (134), Expect = 6e-22 Identities = 158/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 480555 AGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTG 480614 || || || ||||| ||||||||| ||| || || ||| || || | ||||| | | Sbjct 394832 AGCCGAAGGACAAGGTGAAGTGTAGATTCCTTCTGAATATTGTAGTCGGAGAGAGTGCGG 394891 Query 480615 TTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCC 480674 ||| || ||||| || ||||| || |||||||||||||| |||||||| || || ||| Sbjct 394892 CCATCCTCGAGTTGTTTGCCAGCGAAGATAAGACGTTGTTGGTCAGGAGGGATGCCCTCC 394951 Query 480675 TTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGT 480733 || || |||||||| |||||| ||||| ||||| | || | | || || || Sbjct 394952 TTATCCTGAATCTTCGCCTTGACATTGTCAATGGTATCTGATGACTCGA-CCTCGAGAGT 395010 Query 480734 AATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||| || || || |||||||| |||||||| || Sbjct 395011 GATAGTCTTGCCAGTAAGAGTCTTGACGAAAATCTG 395046 Score = 111 bits (122), Expect = 1e-18 Identities = 121/161 (75%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 480609 GTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATT 480668 |||| | ||| ||||| ||||| || ||||| || ||||||||||||||||||||||| Sbjct 394658 GTTCGGCCATCCTCAAGCTGCTTGCCTGCAAAGATCAGACGTTGTTGATCAGGAGGAATA 394717 Query 480669 CCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCA 480728 || ||||| || ||||||||| |||||| || || || |||| | | ||| Sbjct 394718 CCCTCCTTATCCTGAATCTTTGCCTTGACATTATCGATGGTGTCAGAGGATTCGACTTCG 394777 Query 480729 AGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||| || || || || || | |||||| |||||||| || Sbjct 394778 AGGGTGATCGTCTTGCCCGTCAAAGTCTTGACGAAAATCTG 394818 >seq18 Length=654792 Score = 105 bits (116), Expect = 4e-17 Identities = 158/222 (71%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 474656 TCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAACCGCGAGCTCATAT 474715 ||||| ||| ||||||| || ||||| | ||| |||||| | || || || || Sbjct 486101 TCACCTGAAGAAATTTCGTCCATGGTACTCCTCAAGATGAAAGAGACTGCTGAATCTTAC 486042 Query 474716 CTTGGACAAGAA-GTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCA 474774 || ||| | || ||| | | || || ||||||| || || || || |||||||| || Sbjct 486041 CTCGGA-ACGACCGTATCCAACGCTGTCGTTACTGTCCCCGCCTACTTCAATGATTCCCA 485983 Query 474775 ACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAA 474834 |||||||| || || || || || | ||| | || | || ||| | ||||| || || Sbjct 485982 GCGTCAAGCGACCAAGGACGCCGGTACCATTTCTGGATTGAACGTTCTTCGTATCATCAA 485923 Query 474835 TGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAAGAA 474876 ||| || ||||| || || ||||||||||||| || ||||| Sbjct 485922 TGAGCCCACAGCTGCTGCCATTGCTTATGGTCTCGACAAGAA 485881 >seq1 Length=1986796 Score = 98.7 bits (108), Expect = 6e-15 Identities = 147/206 (71%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 480565 CAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCAA 480624 |||||||||| || ||| || || ||| || || | || || | ||||||| Sbjct 634820 CAAGATGAAGGGTGGATTCCTTCTGAATATTGTAGTCTGAAAGTGTGCGACCGTCTTCAA 634879 Query 480625 GTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAA 480684 ||||||| || ||||| || | ||| ||||| || || || || |||||||||||||| | Sbjct 634880 GTTGCTTGCCGGCAAAGATCAAACGCTGTTGGTCGGGGGGGATCCCTTCCTTGTCTTGGA 634939 Query 480685 TCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAATAGTTTTA 480743 |||| ||||||| ||||| ||||||| | | | || |||||||| || || Sbjct 634940 TCTTGGCTTTGACATTGTCAATGGTATCAGAAGACTCCA-CCTCCAGGGTAATGGTCTTG 634998 Query 480744 CCGGTGAGAGTCTTAACGAAAATTTG 480769 || || | |||||| || || ||||| Sbjct 634999 CCAGTCAAAGTCTTTACAAAGATTTG 635024 Score = 93.3 bits (102), Expect = 3e-13 Identities = 114/153 (75%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 480618 TCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTG 480677 |||||||| ||||| || ||||| || || || || || ||||| ||||| ||||||||| Sbjct 634073 TCTTCAAGCTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCAGGCGGAATCCCTTCCTTG 634132 Query 480678 TCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAAT 480736 || ||||||||| || || ||||| || || | || | | || ||| ||||| Sbjct 634133 TCCTGAATCTTTGCCTTCACGTTGTCAATCGTGTCCGATGACTCCACTTCCAA-CGTAAT 634191 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || ||||| || ||||| |||||||| || Sbjct 634192 CGTCTTGCCGGTCAGCGTCTTCACGAAAATCTG 634224 Score = 87.8 bits (96), Expect = 1e-11 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611 || ||||| || || ||||| || || ||||| | || ||||||| ||||| Sbjct 634235 CGCAGACGCAGAACGAGATGCAGCGTCGACTCTTTCTGGATGTTGTAATCAGACAGAGTG 634294 Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671 | |||||||| || ||||| ||||| || | |||||||| ||||||||||| || Sbjct 634295 CGACCGTCTTCAAGCTGTTTTCCGGCAAAGATCAAGCGTTGTTGGTCAGGAGGAATGCCC 634354 Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGG 480731 |||||||| || || || |||||| ||||| || || | | | || || Sbjct 634355 TCCTTGTCCTGGATTTTCGCCTTGACATTATCAATCGTGTCGGAAGATTCAACCTCGAGC 634414 Query 480732 GTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || || || || ||||| || |||||||| Sbjct 634415 GTGATGGTCTTGCCCGTCAGCGTCTTGACAAAAATTTG 634452 >seq39 Length=420478 Score = 96.9 bits (106), Expect = 2e-14 Identities = 95/123 (77%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 474748 TGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGC 474807 |||||| ||||| || || |||||||| |||| || || |||||||| || ||||| Sbjct 212623 TGTTCCCGCATACTTCAACGATTCTCAGCGTCTGGCCACCAAAGATGCTGGTGCCATTGC 212682 Query 474808 AGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCT 474867 || ||| |||| | ||||| ||||| ||||| || || ||||| |||| |||||||| Sbjct 212683 TGGCCTTGATGTCCTTCGTATCATTAACGAACCTACCGCTGCCGCCATTGCCTATGGTCT 212742 Query 474868 TGA 474870 ||| Sbjct 212743 TGA 212745 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268104048219296