Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq3 113 5e-20 >seq3 Length=1746238 Score = 113 bits (124), Expect = 5e-20 Identities = 341/515 (66%), Gaps = 19/515 (4%) Strand=Plus/Minus Query 64714 TGGACTGCGGAAGAAGTTGATTTGTCCAAAGATCTTGACGACTGGAAG--AC-CCTGAAT 64770 ||||| || || || | ||| | |||||||| | |||| ||||| || ||| ||| Sbjct 1247735 TGGACGGCCGAGGAGATGGATCTTTCCAAAGACATATACGATTGGAATGAACGCCTCAAT 1247676 Query 64771 GAAAATGAAAAGAAATTCATAAAGTACATCCTGGCATTCTTTGCTGGGTCCGATGGAATT 64830 || ||||| | || || | | | |||| || ||||||| |||||||| || Sbjct 1247675 GACAATGAGCGCCACTTTATCTCGCATGTTTTGGCCTTTTTTGCTGCTTCCGATGGCATC 1247616 Query 64831 GTTTTTGAGAA---TATCAATAACAATTTTGCGGATGAAGTGCAGATAAGCGAAGCGCGC 64887 || || || | || | || |||| | | ||||| ||| ||||| ||| Sbjct 1247615 GTCAACGAAAACCTTGTCGA--ACGCTTTTCCA-ACGAAGTTCAGGCCGCTGAAGCTCGC 1247559 Query 64888 TCATTCTACGCATATCAATGCCATAATG-AAATGGTTCATGGCGAAACATATTCAAAATT 64946 | ||||| | | |||| | || ||| ||| ||||| |||||| || || | Sbjct 1247558 TGCTTCTATGGTTTTCAAATC-ATGATGGAAAACATTCATTCCGAAACGTACTCTCTCCT 1247500 Query 64947 GATTGACAAATACATTAAGGATGGATCTGAAAAGAAGCAGTTATTTGAAGCCATCCAAAC 65006 || |||| ||||| ||||| | ||||| || | | ||||| |||||| | || Sbjct 1247499 CATAGACACTTACATCAAGGACCAAGCTGAACGCGAGTATCTTTTTGATGCCATCGAGAC 1247440 Query 65007 TGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTT---TGACACAAAGTC 65063 | || ||||| || ||||| ||||||| | || ||| | ||||| || || Sbjct 1247439 CATCCCCTGTATCAAGCGTAAGGCTGAATGGGCCCTCAAGTGGATATCTGACAAGAACTC 1247380 Query 65064 TCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGG 65123 | | |||||||| || | | || ||||| |||||| || |||||||| || || Sbjct 1247379 TA---CATTCGCCGAACGATTGGTCGCATTTGCAGCTGTGGAAGGCATCTTCTTTTCAGG 1247323 Query 65124 GTCATTCTGCG-CTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCT 65182 || || ||| | || | |||| | |||||||| ||||| ||||| ||| || ||||| Sbjct 1247322 CTCCTT-TGCATCAATCTTTTGGCTCAAGAAGCGTGGTCTGATGCCTGGCTTAACCTTCT 1247264 Query 65183 CAAATGAACTTATTTCCCGAGATGAGGGTCTCCAC 65217 ||||||| ||||| || ||||||||| | ||| Sbjct 1247263 CAAATGAGCTTATCAGTCGTGATGAGGGTATGCAC 1247229 Score = 87.8 bits (96), Expect = 2e-12 Identities = 286/438 (65%), Gaps = 10/438 (2%) Strand=Plus/Plus Query 64796 ACATCCTGGCATTCTTTGCTGGGTCCGATGGAATTGTTTTTGAGAATATCAATAACAATT 64855 || |||| ||||| ||||||| ||||| || || || ||||||| || | | | | Sbjct 1249041 ACGTCCTCGCATTTTTTGCTGCTTCCGACGGCATCGTGAATGAGAATCTCCTTGAGAGGT 1249100 Query 64856 TTGCGGATGAAGTGCAGATAAGCGAAGCGCGCTCATTCTACGCATATCAATGCCATAATG 64915 || | |||| | |||||| || || || | ||||||| | ||| || ||| Sbjct 1249101 TTTCTAGTGAAATACAGATAGCTGAGGCACGTTGCTTCTACGGCTTCCAAATT-ATGATG 1249159 Query 64916 -AAATGGTTCATGGCGAAACATATTCAAAATTGATTGACAAATACATTAAGGATGGATCT 64974 ||| ||||| ||||| || || | | || || | ||||| |||||| | Sbjct 1249160 GAAAATGTTCACTCGGAAACGTACTCTTTACTTATCGATACCTACATCAAGGATCCAGAA 1249219 Query 64975 GAAAAGAAGCAGTTATTTGAAGCCATCCAAACTGTACCATGTATTGAGAAGAAGGCGAAA 65034 ||| | || | || || |||||| |||| | ||||| || || || || | Sbjct 1249220 GAACGCACACATCTTTTCGACGCCATCGAAACCATCTCATGTGTTAAGCGTAAAGCTGAT 1249279 Query 65035 TGGGCAATGAAATGGTTT---GACACAAAGTCTCGCTCCTTCGCCGAGCGCCTTTTTGCG 65091 ||||| | | |||| | || | |||| | | || || || || || |||| Sbjct 1249280 TGGGCTCTCAGATGGATATCGGATCAACAGTC---CACTTTTGCTGAACGACTCGTTGCT 1249336 Query 65092 TTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGC-GCTATTTATTGGTTGAA 65150 || || ||| || || ||||| ||||| ||||| || ||| ||||| | ||| | || Sbjct 1249337 TTCGCCGCTGTAGAAGGGATCTTTTTCTCTGGGTCTTT-TGCTGCTATCTTCTGGATCAA 1249395 Query 65151 GAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGG 65210 ||||||||| | ||||| || || ||||| |||||||| || ||| || ||||| Sbjct 1249396 GAAGCGGGGATTAATGCCTGGTCTTACGTTCTCCAATGAACTCATCAGCCGCGACGAGGG 1249455 Query 65211 TCTCCACCAGGAGTTTGC 65228 || ||| ||| ||||| Sbjct 1249456 CCTTCACACGGATTTTGC 1249473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596556535125760