Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq2 89.7 1e-12 seq1 86.0 1e-11 >seq2 Length=1435055 Score = 89.7 bits (98), Expect = 1e-12 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 192333 ATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATTG 192392 ||| | ||| | |||||| || || ||||| || |||||||| |||| || | || Sbjct 394618 ATGCAGAGTCGACTCTTTCTGTATGTTGTAATCTGACAATGTTCGGCCATCCTCAAGCTG 394677 Query 192393 TTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTT 192452 || || |||||||| | | ||||||||||| || || || || ||||| || || || Sbjct 394678 CTTGCCTGCAAAGATCAGACGTTGTTGATCAGGAGGAATACCCTCCTTATCCTGAATCTT 394737 Query 192453 ATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGT 192512 || |||||| || | || || ||||| ||||| || || || || || || || Sbjct 394738 TGCCTTGACATTATCGATGGTGTCAGAGGATTCGACTTCGAGGGTGATCGTCTTGCCCGT 394797 Query 192513 TAATGTTTTAATAAATATCTGCAT 192536 || || || | || |||||||| Sbjct 394798 CAAAGTCTTGACGAAAATCTGCAT 394821 >seq1 Length=1986796 Score = 86.0 bits (94), Expect = 1e-11 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 192355 ATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTC 192414 ||||| || || || | || || |||| || | || || || || ||||| || | | Sbjct 634553 ATATTGTAGTCTGAGAGGGTGCGACCATCTTCGAGCTGCTTCCCGGCGAAGATCAAGCGC 634612 Query 192415 TGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAA 192474 |||||||| || || || ||||| || || || ||||| || || ||| || | | Sbjct 634613 TGTTGATCGGGAGGGATGCCTTCCTTGTCCTGGATTTTGGCCTTGACGTTATCAATGGTA 634672 Query 192475 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGC 192534 || ||||| || || || ||||||||||| || || || || || || | ||| || ||| Sbjct 634673 TCGGACGACTCGACCTCGAGAGTAATGGTCTTTCCGGTCAAAGTCTTGACAAAGATTTGC 634732 Query 192535 AT 192536 || Sbjct 634733 AT 634734 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984457900885200