Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq2 86.0 1e-11 >seq2 Length=1435055 Score = 86.0 bits (94), Expect = 1e-11 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||| ||||| || || | || | || | |||| || || |||||| || || Sbjct 394820 ATACCTCCTCTGAGCCGAAGGACAAGGTGAAGTGTAGATTCCTTCTGAATATTGTAGTCG 394879 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | || || | || || | |||||| ||||| || || | | ||||||||||| Sbjct 394880 GAGAGAGTGCGGCCATCCTCGAGTTGTTTGCCAGCGAAGATAAGACGTTGTTGGTCAGGA 394939 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || || || ||||| || || || || ||||| || |||||||| || || Sbjct 394940 GGGATGCCCTCCTTATCCTGAATCTTCGCCTTGACATTGTCAATGGTATCTGATGACTCG 394999 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || ||||| || || || ||||| | || || | ||| |||||||| Sbjct 395000 ACCTCGAGAGTGATAGTCTTGCCAGTAAGAGTCTTGACGAAAATCTGCAT 395049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905116177521600