Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq3 89.7 6e-12 >seq3 Length=1746238 Score = 89.7 bits (98), Expect = 6e-12 Identities = 196/289 (68%), Gaps = 11/289 (4%) Strand=Plus/Plus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| || || |||||||| | || || |||| | ||| ||||| || || ||||| Sbjct 1247235 ACCCTCATCACGACTGATAAGCTCATTTGAGAAGGTTAAGCCAGGCATCAGACCACGCTT 1247294 Query 869239 CTTGAGCCAAAAGA-TGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAA 869297 |||||||||||||| || ||| || ||| || || |||||||| || || || |||| Sbjct 1247295 CTTGAGCCAAAAGATTGATGCA-AAGGAGCCTGAAAAGAAGATGCCTTCCACAGCTGCAA 1247353 Query 869298 AGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGT---TGATCCACTTCATCG 869354 | ||| | || ||||| || ||| ||| | ||||| |||||||| | | Sbjct 1247354 ATGCGACCAATCGTTCGGCGAA--TGTAGAG----TTCTTGTCAGATATCCACTTGAGGG 1247407 Query 869355 CCCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCT 869414 |||| || ||||| | | | | || | || |||||||| ||| || | || Sbjct 1247408 CCCATTCAGCCTTACGCTTGATACAGGGGATGGTCTCGATGGCATCAAAAAGATACTCGC 1247467 Query 869415 TTTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463 ||| || ||||||||| || ||||| || ||||| || || || || Sbjct 1247468 GTTCAGCTTGGTCCTTGATGTAAGTGTCTATGAGGAGAGAGTACGTTTC 1247516 Score = 87.8 bits (96), Expect = 2e-11 Identities = 123/169 (73%), Gaps = 3/169 (2%) Strand=Plus/Plus Query 869717 AGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAAAAAGCCAGGACGTGCTTGATAAAG 869776 ||||| ||| |||||||| ||| || || ||||| |||| || ||| ||||||| Sbjct 1247602 AGGTTTTCGTTGACGATGCCATCGGAAGCAGCAAAAAAGGCCAAAACATGCGAGATAAAG 1247661 Query 869777 TGGCGCTCGTCGTCGCTGAG-CGA-CAC-CCAGTGGACGGTGTCGGCGCTGAGGTCCACC 869833 |||||||| | ||| |||| || || ||| | | |||| | || |||| | Sbjct 1247662 TGGCGCTCATTGTCATTGAGGCGTTCATTCCAATCGTATATGTCTTTGGAAAGATCCATC 1247721 Query 869834 TCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTACATCTCCCATA 869882 |||||||| ||||||| || || || |||||||||||||||| ||||| Sbjct 1247722 TCCTCGGCCGTCCAGAAGGATGCTTCTGCCTTTTTGTACATCTGCCATA 1247770 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106995422675384