Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq2 125 6e-24 seq1 122 8e-23 >seq2 Length=1435055 Score = 125 bits (138), Expect = 6e-24 Identities = 155/211 (73%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || | || || || || || || |||||||| ||| || | Sbjct 394821 ATGCAGATTTTCGTCAAGACTTTGACGGGCAAGACGATCACCCTCGAAGTCGAATCCTCT 394762 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||| || || || || || || ||||| |||||| Sbjct 394761 GACACCATCGATAATGTCAAGGCAAAGATTCAGGATAAGGAGGGTATTCCTCCTGATCAA 394702 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| |||||||||| || || ||||| |||||| ||| |||||||||| ||| Sbjct 394701 CAACGTCTGATCTTTGCAGGCAAGCAGCTTGAGGATGGCCGAACATTGTCAGATTACAAC 394642 Query 24884 ATTCAAAAGGAATCGACACTACA-CTTGGTG 24913 || || || || ||||| || || ||||||| Sbjct 394641 ATACAGAAAGAGTCGACTCTGCATCTTGGTG 394611 Score = 84.2 bits (92), Expect = 2e-11 Identities = 81/103 (79%), Gaps = 1/103 (1%) Strand=Plus/Minus Query 24809 ATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAAC 24868 || |||||||| ||||| ||| | ||||||||||| |||||||| |||||| |||| Sbjct 395172 ATCCCTCCCGACCAACAGCGTCTCATCTTTGCCGGCAAACAGCTTGAGGATGGTAGAACA 395113 Query 24869 ATGTCAGATTATAACATTCAAAAGGAATCGACACTACA-CTTG 24910 | || || ||||| || || ||||||||||| || || |||| Sbjct 395112 CTCTCCGACTATAATATCCAGAAGGAATCGACCCTGCATCTTG 395070 >seq1 Length=1986796 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | || ||||| || || || || || |||||||| || ||| | || Sbjct 634455 ATGCAAATTTTTGTCAAGACGCTGACGGGCAAGACCATCACGCTCGAGGTTGAATCTTCC 634396 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || || ||||| ||||| || || || ||||| || ||| Sbjct 634395 GACACGATTGATAATGTCAAGGCGAAAATCCAGGACAAGGAGGGCATTCCTCCTGACCAA 634336 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||||| |||||||||||||| |||||||| || || | | |||| ||||| ||| Sbjct 634335 CAACGCTTGATCTTTGCCGGAAAACAGCTTGAAGACGGTCGCACTCTGTCTGATTACAAC 634276 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || || || ||||| || || | || |||| ||||||| || Sbjct 634275 ATCCAGAAAGAGTCGACGCTGCATCTCGTTCTGCGTCTGCGCGGGGG 634229 Score = 118 bits (130), Expect = 1e-21 Identities = 155/211 (73%), Gaps = 3/211 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| | || || | ||||| || || ||||| ||||| || || | || Sbjct 634734 ATGCAAATCTTTGTCAAGACTTTGACCGGAAAGACCATTACTCTCGAGGTCGAGTCGTCC 634675 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || |||| || | ||| ||||| ||||| ||||| || ||||||||||| Sbjct 634674 GATACCATTGATAACGTCAAGGCCAAA-ATCCAGGACAAGGAAGGCATCCCTCCCGATCA 634616 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| || |||||||| |||||||| ||||| || ||| | | | | ||||| || || Sbjct 634615 ACAGCGCTTGATCTTCGCCGGGAAGCAGCTCGAAGATGGTCGCACCCTCTCAGACTACAA 634556 Query 24883 CATTCAAAAGGAATCGACACTACA-CTTGGT 24912 ||||| || || || || || || |||||| Sbjct 634555 TATTCAGAAAGAGTCCACCCTCCATCTTGGT 634525 Score = 107 bits (118), Expect = 2e-18 Identities = 154/212 (73%), Gaps = 5/212 (2%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| | || || | || || || || ||||| || || || || | | Sbjct 635027 ATGCAAATCTTTGTAAAGACTTTGACTGGCAAGACCATTACCCTGGAGGTGGAGTCTTCT 634968 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || ||| |||||||||||||| ||||| || || ||||| ||| Sbjct 634967 GATACCATTGACAATGTCAAAGCCAAGATCCAAGACAAGGAAGGGATCCCCCCCGACCAA 634908 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA--TTCGAGAAACATGTCAGATTATA 24881 || ||||||||||||||||| || || || || || ||| | || | ||||| || | Sbjct 634907 CAGCGTTTGATCTTTGCCGGCAAGCAACTTGAAGACGGTCG-CACAC-TTTCAGACTACA 634850 Query 24882 ACATTCAAAAGGAATCGACACTACA-CTTGGT 24912 | ||||| |||||||| || || || |||||| Sbjct 634849 ATATTCAGAAGGAATCCACCCTTCATCTTGGT 634818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449887747242560