Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq3 123 4e-22 seq21 86.0 1e-10 >seq3 Length=1746238 Score = 123 bits (136), Expect = 4e-22 Identities = 228/331 (69%), Gaps = 9/331 (3%) Strand=Plus/Plus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 ||| || || |||||||| | || || ||| | ||| ||||| || || ||||| Sbjct 1247235 ACCCTCATCACGACTGATAAGCTCATTTGAGAAGGTTAAGCCAGGCATCAGACCACGCTT 1247294 Query 794400 CTTGAGCCAAAAGAT---GGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGC 794456 ||||||||||||||| ||| || | ||| || || |||||||| || || || || Sbjct 1247295 CTTGAGCCAAAAGATTGATGCAAAGGA---GCCTGAAAAGAAGATGCCTTCCACAGCTGC 1247351 Query 794457 AAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGC 794516 ||| |||| | || ||||| || ||| || | | | | | |||||||| | || Sbjct 1247352 AAATGCGACCAATCGTTCGGCGAA--TGTAGAGTTCTTGTCAGAT-ATCCACTTGAGGGC 1247408 Query 794517 CCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTT 794576 ||| || ||||| | | | |||| | || |||||||| ||| || | || Sbjct 1247409 CCATTCAGCCTTACGCTTGATACAGGGGATGGTCTCGATGGCATCAAAAAGATACTCGCG 1247468 Query 794577 CTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTT 794636 || | ||||||||| ||| ||||| |||||||| ||||| || || || || ||||| Sbjct 1247469 TTCAGCTTGGTCCTTGATGTAAGTGTCTATGAGGAGAGAGTACGTTTCGGAATGAATGTT 1247528 Query 794637 TTCGATGGCGATCTGGAAGCCATAAAAGCAG 794667 ||| || ||| || || ||||| |||||| Sbjct 1247529 TTCCATCATGATTTGAAAACCATAGAAGCAG 1247559 >seq21 Length=1130388 Score = 86.0 bits (94), Expect = 1e-10 Identities = 100/133 (75%), Gaps = 4/133 (3%) Strand=Plus/Minus Query 2071864 AACAGGTC--GCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGC 2071921 || ||||| |||| ||| ||| | ||||| ||||| ||||| || || ||||| | Sbjct 175086 AAGAGGTCAGGCAC--CCAAAGGGCATAAAAAAGATCTCGCGCACGAACTTCTTCCTTTC 175029 Query 2071922 CGTGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGC 2071981 | ||||||||| ||| ||| || | |||| || |||||||||||| ||||| | |||| Sbjct 175028 CATGGTTCTTTCTCAAGTCAAGGAATTCGAAGACGTCGGCGTGCCAAGGCTCGATGTAGA 174969 Query 2071982 AGGCAAAGGCGCC 2071994 |||||||| || Sbjct 174968 TCGCAAAGGCACC 174956 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916060031769128