Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq1 105 4e-18 seq2 96.9 2e-15 seq20 82.4 5e-11 seq7 82.4 5e-11 >seq1 Length=1986796 Score = 105 bits (116), Expect = 4e-18 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 34772 AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGT 34831 || |||| |||| ||||||||||| || ||||| || || |||| | || || ||| Sbjct 634822 AGATGAAGGGTGGATTCCTTCTGAATATTGTAGTCTGAAAGTGTGCGACCGTCTTCAAGT 634881 Query 34832 TGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATT 34891 ||||| ||||| ||||||| || || ||||| | || | ||| |||||||| | || Sbjct 634882 TGCTTGCCGGCAAAGATCAAACGCTGTTGGTCGGGGGGGATCCCTTCCTTGTCTTGGATC 634941 Query 34892 TTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCC 34951 || |||||| | || | ||| | ||| || || | ||| |||||||| || Sbjct 634942 TTGGCTTTGACATTGTCAATGGTATCAGAAGACTCCACCTCCAGGGTAATGGTCTTGCCA 635001 Query 34952 GTGAGGGTCTTTACAAAGATCTGCAT 34977 || | |||||||||||||| ||||| Sbjct 635002 GTCAAAGTCTTTACAAAGATTTGCAT 635027 Score = 102 bits (112), Expect = 5e-17 Identities = 158/223 (71%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 34757 CTCAACCTCAGG-ACCAGG-TGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGC 34814 |||||| | | | |||| | || | |||| ||| |||||||| || ||||| || ||| Sbjct 634512 CTCAACTTTACGTACCAAGATGGAGGGTGGACTCTTTCTGAATATTGTAGTCTGAGAGGG 634571 Query 34815 TGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCC 34874 |||| |||| || || ||||| ||||||||||||| || || || || | || | | Sbjct 634572 TGCGACCATCTTCGAGCTGCTTCCCGGCGAAGATCAAGCGCTGTTGATCGGGAGGGATGC 634631 Query 34875 CCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAA 34934 | |||||||| | ||||| |||||| | || | || | |||||| || | Sbjct 634632 CTTCCTTGTCCTGGATTTTGGCCTTGACGTTATCAATGGTATCGGACGACTCGACCTCGA 634691 Query 34935 CGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || ||||||||||| || | ||||| |||||||| ||||| Sbjct 634692 GAGTAATGGTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCAT 634734 Score = 100 bits (110), Expect = 2e-16 Identities = 147/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 34770 CCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCA 34829 |||| || | |||||||||||||| ||||| ||||| || || | | | | || || | Sbjct 634020 CCAGATGCAACGTGCTCTCCTTCTGGATGTTGTAGTCAGAAAGCGTCCTCCCGTCTTCAA 634079 Query 34830 GTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTA 34889 | ||||| || || |||||||| || |||||||| |||| | ||| |||||||| | | Sbjct 634080 GCTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCAGGCGGAATCCCTTCCTTGTCCTGAA 634139 Query 34890 TTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTC 34949 | ||| || ||| | |||| || | ||| || || | || || ||||| | Sbjct 634140 TCTTTGCCTTCACGTTGTCAATCGTGTCCGATGACTCCACTTCCAACGTAATCGTCTTGC 634199 Query 34950 CCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || || ||||| || || |||||||| Sbjct 634200 CGGTCAGCGTCTTCACGAAAATCTGCAT 634227 Score = 86.0 bits (94), Expect = 4e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||| ||||| ||||| || || || || |||| | || || || || |||||||| || Sbjct 634264 CTCTTTCTGGATGTTGTAATCAGACAGAGTGCGACCGTCTTCAAGCTGTTTTCCGGCAAA 634323 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||| ||||| ||||| | || | ||||||||||| | ||||| ||||| Sbjct 634324 GATCAAGCGTTGTTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATTTTCGCCTTGACATT 634383 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | |||| || | || || || | || |||||||| ||||| || ||||| || Sbjct 634384 ATCAATCGTGTCGGAAGATTCAACCTCGAGCGTGATGGTCTTGCCCGTCAGCGTCTTGAC 634443 Query 34966 AAAGATCTGCAT 34977 ||| || ||||| Sbjct 634444 AAAAATTTGCAT 634455 >seq2 Length=1435055 Score = 96.9 bits (106), Expect = 2e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||| || | || ||||| ||||||| || ||||||||||| || ||||| || Sbjct 394823 CCTCCTCTGAGCCGAAGGACAAGGTGAAGTGTAGATTCCTTCTGAATATTGTAGTCGGAG 394882 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || |||| |||| || ||||| || || |||||||| || ||||| ||||| | || Sbjct 394883 AGAGTGCGGCCATCCTCGAGTTGTTTGCCAGCGAAGATAAGACGTTGTTGGTCAGGAGGG 394942 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | |||||||| || | || || ||||| | || | || | |||||| Sbjct 394943 ATGCCCTCCTTATCCTGAATCTTCGCCTTGACATTGTCAATGGTATCTGATGACTCGACC 395002 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || | || || ||||| || || || ||||| || || ||||||||| Sbjct 395003 TCGAGAGTGATAGTCTTGCCAGTAAGAGTCTTGACGAAAATCTGCATG 395050 >seq20 Length=1067518 Score = 82.4 bits (90), Expect = 5e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| ||||| ||| ||||||||||||||| ||||| || | || |||| Sbjct 158256 AGGACCAAGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCACTCAGAGTACGGCCATCC 158315 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTC 34863 || |||||||||||||| ||||||| ||||| ||||| Sbjct 158316 TCAAGTTGCTTTCCGGCAAAGATCAAACGTTGTTGGTC 158353 >seq7 Length=1106505 Score = 82.4 bits (90), Expect = 5e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||||||||| ||| ||||||||||||||| ||||| ||| | || |||| Sbjct 360727 AGCACCAGGTGAAGGGTAGACTCCTTCTGAATGTTGTAGTCACTAAGGGTACGGCCATCC 360786 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTC 34863 || || ||||| |||||||| ||||| || |||||||| Sbjct 360787 TCAAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTC 360824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325685845644488