Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq2 159 7e-34 seq1 156 8e-33 >seq2 Length=1435055 Score = 159 bits (176), Expect = 7e-34 Identities = 157/203 (77%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 |||||||| || ||||||||||| || ||||| || | ||| || || || || || Sbjct 394619 TGCAGAGTCGACTCTTTCTGTATGTTGTAATCTGACAATGTTCGGCCATCCTCAAGCTGC 394678 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || || |||||||| || | ||||||||| ||||| || || |||||||| ||||||||| Sbjct 394679 TTGCCTGCAAAGATCAGACGTTGTTGATCAGGAGGAATACCCTCCTTATCCTGAATCTTT 394738 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 || || ||||| || || || ||| | ||| ||||| | || ||||||||||| ||| Sbjct 394739 GCCTTGACATTATCGATGGTGTCAGAGGATTCGACTTCGAGGGTGATCGTCTTGCCCGTC 394798 Query 82788 AACGTCTTTACAAATATCTGCAT 82810 || ||||| || || |||||||| Sbjct 394799 AAAGTCTTGACGAAAATCTGCAT 394821 >seq1 Length=1986796 Score = 156 bits (172), Expect = 8e-33 Identities = 157/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || || || ||||| ||||| ||||| || || || || | | ||||||||| ||||| Sbjct 634825 TGAAGGGTGGATTCCTTCTGAATATTGTAGTCTGAAAGTGTGCGACCGTCTTCAAGTTGC 634884 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || || |||||||| | | ||||| || || || || |||||||| ||||| ||||| Sbjct 634885 TTGCCGGCAAAGATCAAACGCTGTTGGTCGGGGGGGATCCCTTCCTTGTCTTGGATCTTG 634944 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 ||||| ||||| ||||| |||||| || || || |||| || || |||||||| ||| Sbjct 634945 GCTTTGACATTGTCAATGGTATCAGAAGACTCCACCTCCAGGGTAATGGTCTTGCCAGTC 635004 Query 82788 AACGTCTTTACAAATATCTGCATT 82811 || ||||||||||| || |||||| Sbjct 635005 AAAGTCTTTACAAAGATTTGCATT 635028 Score = 138 bits (152), Expect = 2e-27 Identities = 145/191 (76%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 82620 TCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAG 82679 || ||||| || || || ||||| || | || |||||||| || || || || |||||| Sbjct 634037 TCCTTCTGGATGTTGTAGTCAGAAAGCGTCCTCCCGTCTTCAAGCTGCTTGCCCGCAAAG 634096 Query 82680 ATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTT 82739 || || | || || || || || || |||||||| || ||||||||||| || || || Sbjct 634097 ATCAGGCGCTGCTGGTCAGGCGGAATCCCTTCCTTGTCCTGAATCTTTGCCTTCACGTTG 634156 Query 82740 TCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACA 82799 |||||||| || | || |||||||| || ||||||||||| |||| |||||| || Sbjct 634157 TCAATCGTGTCCGATGACTCCACTTCCAACGTAATCGTCTTGCCGGTCAGCGTCTTCACG 634216 Query 82800 AATATCTGCAT 82810 || |||||||| Sbjct 634217 AAAATCTGCAT 634227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981805160433928