Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq1 120 3e-22 seq2 111 2e-19 >seq1 Length=1986796 Score = 120 bits (132), Expect = 3e-22 Identities = 151/205 (74%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||||||||||||||| |||||||| || | ||| ||| | || ||||||| Sbjct 634531 ATGGAGGGTGGACTCTTTCTGAATATTGTAGTCTGAGAGGGTGCGACCA-TCTTCGAGCT 634589 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 |||| || ||| | || | ||||| || ||||||||||||||||||||||| ||| | Sbjct 634590 GCTTCCCGGCGAAGATCAAGCGCTGTTGATCGGGAGGGATGCCTTCCTTGTCCTGGATTT 634649 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||||| | |||| || |||| | ||| || |||| || | ||| || |||| Sbjct 634650 TGGCCTTGACGTTATCAATGGTATCGGACGACTCGACCTCGAGAGTAATGGTCTTTCCGG 634709 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 ||| ||| || || || || ||||| Sbjct 634710 TCAAAGTCTTGACAAAGATTTGCAT 634734 Score = 113 bits (124), Expect = 4e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCCGCGTA 133528 ||| ||||| || ||||| || | ||| | ||| || |||||||||||||| | Sbjct 634036 CTCCTTCTGGATGTTGTAGTCAGAAAGCGTCCTCCCGTCTTCAAGCTGCTTGCCCGCAAA 634095 Query 133529 AATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTG 133588 || || ||||||||||| || || || ||||||||||| |||||| ||| | | Sbjct 634096 GATCAGGCGCTGCTGGTCAGGCGGAATCCCTTCCTTGTCCTGAATCTTTGCCTTCACGTT 634155 Query 133589 CTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTAC 133648 |||| |||||| | | |||||| || | || | || ||||||||||| || || || Sbjct 634156 GTCAATCGTGTCCGATGACTCCACTTCCAACGTAATCGTCTTGCCGGTCAGCGTCTTCAC 634215 Query 133649 GAAAATCTGCAT 133660 |||||||||||| Sbjct 634216 GAAAATCTGCAT 634227 Score = 102 bits (112), Expect = 8e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||||||||| || |||||||| || ||| ||| ||| || ||||| || || Sbjct 634259 GTCGACTCTTTCTGGATGTTGTAATCAGACAGAGTGCGAC-CGTCTTCAAGCTGTTTTCC 634317 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || | || || ||||| ||||| ||||| |||||||| ||| || ||| Sbjct 634318 GGCAAAGATCAAGCGTTGTTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATTTTCGCCTT 634377 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | |||| |||||||| | || || |||| |||| ||| ||||| ||||| || Sbjct 634378 GACATTATCAATCGTGTCGGAAGATTCAACCTCGAGCGTGATGGTCTTGCCCGTCAGCGT 634437 Query 133643 TTTTACGAAAATCTGCAT 133660 || || ||||| ||||| Sbjct 634438 CTTGACAAAAATTTGCAT 634455 Score = 102 bits (112), Expect = 8e-17 Identities = 147/205 (72%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | |||||| || ||||| |||||||| || | ||| ||| ||| || || | Sbjct 634824 ATGAAGGGTGGATTCCTTCTGAATATTGTAGTCTGAAAGTGTGCGACC-GTCTTCAAGTT 634882 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 ||||||| || | || | ||||| |||||||| ||||| ||||||||||| ||||| Sbjct 634883 GCTTGCCGGCAAAGATCAAACGCTGTTGGTCGGGGGGGATCCCTTCCTTGTCTTGGATCT 634942 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | |||| | |||| || || | | |||||| || | ||| | ||| ||||| | Sbjct 634943 TGGCTTTGACATTGTCAATGGTATCAGAAGACTCCACCTCCAGGGTAATGGTCTTGCCAG 635002 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 ||| ||| ||||| || || ||||| Sbjct 635003 TCAAAGTCTTTACAAAGATTTGCAT 635027 >seq2 Length=1435055 Score = 111 bits (122), Expect = 2e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATC-GCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 || |||||||||||||| |||||||| | | || | | | | ||||| ||||||||||| Sbjct 394625 GTCGACTCTTTCTGTATGTTGTAATCTGACAATGTTCGGCCA-TCCTCAAGCTGCTTGCC 394683 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || || || || || || ||||| || || ||||| || |||||| ||| Sbjct 394684 TGCAAAGATCAGACGTTGTTGATCAGGAGGAATACCCTCCTTATCCTGAATCTTTGCCTT 394743 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | ||||| | || || || |||| ||||| || ||||| |||| ||| Sbjct 394744 GACATTATCGATGGTGTCAGAGGATTCGACTTCGAGGGTGATCGTCTTGCCCGTCAAAGT 394803 Query 133643 TTTTACGAAAATCTGCAT 133660 || |||||||||||||| Sbjct 394804 CTTGACGAAAATCTGCAT 394821 Score = 104 bits (114), Expect = 2e-17 Identities = 144/199 (72%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || || ||||| |||||||| ||| | ||| | | | |||||||| || ||||| Sbjct 394853 GTAGATTCCTTCTGAATATTGTAGTCGGAGAGAGTGCGGCCA-TCCTCGAGTTGTTTGCC 394911 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || || || ||||| ||||||||||| ||||| || ||||| ||| Sbjct 394912 AGCGAAGATAAGACGTTGTTGGTCAGGAGGGATGCCCTCCTTATCCTGAATCTTCGCCTT 394971 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | |||| || || | | ||| || |||| |||| || ||||| || ||||| Sbjct 394972 GACATTGTCAATGGTATCTGATGACTCGACCTCGAGAGTGATAGTCTTGCCAGTAAGAGT 395031 Query 133643 TTTTACGAAAATCTGCATG 133661 || ||||||||||||||| Sbjct 395032 CTTGACGAAAATCTGCATG 395050 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483410213084480