Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq1 96.9 2e-15 seq2 89.7 3e-13 >seq1 Length=1986796 Score = 96.9 bits (106), Expect = 2e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||| || | || ||| | || | ||| || || |||||| || ||||||||||| || Sbjct 634228 ACCCCCGCGCAGACGCAGAACGAGATGCAGCGTCGACTCTTTCTGGATGTTGTAATCAGA 634287 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| |||| || | |||||||||||||| ||||| || || || || | || Sbjct 634288 CAGAGTGCGACCGTCTTCAAGCTGTTTTCCGGCAAAGATCAAGCGTTGTTGGTCAGGAGG 634347 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | || || ||||| |||||| | | |||| || | |||||| ||||| | Sbjct 634348 AATGCCCTCCTTGTCCTGGATTTTC-GCCTTGACATTATCAATCGTGTCGGAAGATTCAA 634406 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | |||||| || || || || | ||| || ||||| || |||||| Sbjct 634407 CCTCGAGCGTGATGGTCTTGCCCGTCAGCGTCTTGACAAAAATTTGCATA 634456 Score = 95.1 bits (104), Expect = 8e-15 Identities = 155/220 (70%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 33531 CAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCG 33590 |||||||| || | ||| || ||| || || || || ||||| || || |||||||| Sbjct 634811 CAAACGTACCA--AGATGAAGGGTGGATTCCTTCTGAATATTGTAGTCTGAAAGTGTGCG 634868 Query 33591 TTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTC 33650 |||| || | ||| || |||||||| ||||||||||| || || | || | ||||| Sbjct 634869 ACCGTCTTCAAGTTGCTTGCCGGCAAAGATCAAACGCTGTTGGTCGGGGGGGATCCCTTC 634928 Query 33651 TTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCG 33709 ||||| || || | || |||| ||| | ||| || || ||||| || | | Sbjct 634929 CTTGTCTTGGATCTT-GGCTTTGACATTGTCAATGGTATCAGAAGACTCCACCTCCAGGG 634987 Query 33710 TGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || || || || || || || ||||||||||| ||||| Sbjct 634988 TAATGGTCTTGCCAGTCAAAGTCTTTACAAAGATTTGCAT 635027 >seq2 Length=1435055 Score = 89.7 bits (98), Expect = 3e-13 Identities = 150/213 (70%), Gaps = 3/213 (1%) Strand=Plus/Plus Query 33540 CACCAA-ATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGT 33598 |||||| ||| ||||| |||||| |||||||||||||| || | ||| || | || | Sbjct 394611 CACCAAGATGCAGAGTCGACTCTTTCTGTATGTTGTAATCTGACAATGTTCGGCCATCCT 394670 Query 33599 CCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGG 33658 | | || || || ||||| |||| ||| || ||||| | || | ||| || || || Sbjct 394671 CAAGCTGCTTGCCTGCAAAGATCAGACGTTGTTGATCAGGAGGAATACCCTCCTTATCCT 394730 Query 33659 CAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTT 33717 ||| || || | |||| || | |||||| ||||| || || | |||||||| Sbjct 394731 GAATCTT-TGCCTTGACATTATCGATGGTGTCAGAGGATTCGACTTCGAGGGTGATCGTC 394789 Query 33718 TTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || || || || || || || || ||||||||| Sbjct 394790 TTGCCCGTCAAAGTCTTGACGAAAATCTGCATA 394822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328696981347840