Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq2 100 7e-16 seq1 89.7 1e-12 >seq2 Length=1435055 Score = 100 bits (110), Expect = 7e-16 Identities = 145/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || | || || || |||||||| | ||||| ||| |||||| Sbjct 394818 CAGATTTTCGTCAAGACTTTGACGGGCAAGACGATCACCCTCGAAGTCGAATCCTCTGAC 394759 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||||||| || || || || ||| || || ||| Sbjct 394758 ACCATCGATAATGTCAAGGCAAAGATTCAGGATAAGGAGGGTATTCCTCCTGATCAACAA 394699 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || ||||| || || |||||| | || ||||| | || ||| | ||||||||| | Sbjct 394698 CGTCTGATCTTTGCAGGCAAGCAGCTTGAGGATGGCCGAACATTGTCAGATTACAACATA 394639 Query 206353 CAGAAAGAGTCTACTCTTCACCTTG 206377 ||||||||||| ||||| || |||| Sbjct 394638 CAGAAAGAGTCGACTCTGCATCTTG 394614 >seq1 Length=1986796 Score = 89.7 bits (98), Expect = 1e-12 Identities = 126/177 (71%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || ||||| || || || ||||| || ||||||||||| || ||||| | || Sbjct 634212 AAGACGCTGACCGGCAAGACGATTACGTTGGAAGTGGAGTCATCGGACACGATTGACAAC 634153 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||||||| || || ||||| ||| ||| ||| || | || ||||| Sbjct 634152 GTGAAGGCAAAGATTCAGGACAAGGAAGGGATTCCGCCTGACCAGCAGCGCCTGATCTTT 634093 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAG 206361 || || |||||| | ||||| || ||||| | | || |||||| ||||||| ||| Sbjct 634092 GCGGGCAAGCAGCTTGAAGACGGGAGGACGCTTTCTGACTACAACATCCAGAAGGAG 634036 Score = 87.8 bits (96), Expect = 4e-12 Identities = 148/213 (69%), Gaps = 1/213 (0%) Strand=Plus/Minus Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237 ||||| ||| ||||| || || || || ||||| | || || ||| ||| ||||| | Sbjct 634447 TTTTGTCAAGACGCTGACGGGCAAGACCATCACGCTCGAGGTTGAATCTTCCGACACGAT 634388 Query 206238 CGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACT 206297 || || ||| || || || || || || || ||| || ||| ||| | | Sbjct 634387 TGATAATGTCAAGGCGAAAATCCAGGACAAGGAGGGCATTCCTCCTGACCAACAACGCTT 634328 Query 206298 TATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAA 206357 ||||| |||||||| ||| | ||||| || | ||| || | ||||||||| ||||||| Sbjct 634327 GATCTTTGCCGGAAAACAGCTTGAAGACGGTCGCACTCTGTCTGATTACAACATCCAGAA 634268 Query 206358 AGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 |||||| || || || || ||| || | || || Sbjct 634267 AGAGTCGACGCTGCATCTCGTTCTGCGTCTGCG 634235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181794271077592