Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq3 165 1e-34 >seq3 Length=1746238 Score = 165 bits (182), Expect = 1e-34 Identities = 371/543 (68%), Gaps = 17/543 (3%) Strand=Plus/Minus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||||||| | |||||| |||||||| || || ||||| ||||| ||||||||| | || | Sbjct 1247772 GATATGGCAGATGTAC-AAAAAGGCAGAAGCATCCTTCTGGACGGCCGAGGAGATGGATC 1247714 Query 1455835 TCGGCGCCGACACGGTCCACTGGG-TGT-CGC-TGAGCGACGACGAGCGCCATTTCATCA 1455891 | | |||| | | ||| || ||| | | ||| | |||||||| || ||| Sbjct 1247713 TTTCCAAAGACATATACGATTGGAATGAACGCCTCAATGACAATGAGCGCCACTTTATCT 1247654 Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951 ||| || | ||||||||| || || |||||||||||| ||| ||||| | || Sbjct 1247653 CGCATGTTTTGGCCTTTTTT-GCTGCTTCCGATGGCATCGTCAACGAAAACCTTGTCGAA 1247595 Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011 |||||| || || || || | || || || | || || || || || ||| Sbjct 1247594 CGCTTTTCCAACGAAGTTCAGGCCGCTGAAGCTCGCTGCTTCTATGGTTTTCAAATCATG 1247535 Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCG 1456071 || |||||||| || || ||||| ||||| ||||| || ||||| ||| ||||||||| Sbjct 1247534 ATGGAAAACATTCATTCCGAAACGTACTCTCTCCTCATAGACACTTACATCAAGGACCAA 1247475 Query 1456072 GTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCC 1456131 | || || | || ||| |||||||| || | || | | | | ||||| Sbjct 1247474 GCTGAACGCGAGTATCTTTTTGATGCCATCGAGACCATCCCCTGTATCAAGCGTAAGGCT 1247415 Query 1456132 GACTGGGCGATGAAGTGGAT---CAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCG 1456188 || ||||| | |||||||| ||||| | ||| ||| || ||||| || | | Sbjct 1247414 GAATGGGCCCTCAAGTGGATATCTGACAAGAA----CTCTACA-TTCGCCGAACGATTGG 1247360 Query 1456189 TCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGC-GCCATCTTTTGG 1456246 ||| ||||| || || || |||||||| || || ||| || ||| | ||||||||| Sbjct 1247359 TCGCATTTGCAGCTGTGGAAGGCATCTTCTTTTCAGGCTCCTT-TGCATCAATCTTTTGG 1247301 Query 1456247 CTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAGTCGCGA 1456306 ||||||||||| || || ||||| || ||| ||| || || |||||||||| || Sbjct 1247300 CTCAAGAAGCGTGGTCTGATGCCTGG-CTTAACCTTCTCAAATGAGCTTATCAGTCGTGA 1247242 Query 1456307 CGA 1456309 || Sbjct 1247241 TGA 1247239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177642216379824