Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq1 131 2e-25 seq2 107 2e-18 >seq1 Length=1986796 Score = 131 bits (144), Expect = 2e-25 Identities = 156/209 (75%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 35529 CCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCA 35588 ||| ||| ||||| |||||||| || |||||||| || | | || | | |||| || | Sbjct 634020 CCAGATGCAACGTGCTCTCCTTCTGGATGTTGTAGTCAGAAAGCGTCCTCCCGTCTTCAA 634079 Query 35589 GCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGA 35648 ||||||| |||||||| |||| ||||||||||| | |||| | ||||||||| | Sbjct 634080 GCTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCAGGCGGAATCCCTTCCTTGTCCTGAA 634139 Query 35649 TCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTA 35707 ||||| ||||| |||| | | |||||| || ||||| |||| ||| ||||| || Sbjct 634140 TCTTTGCCTTCA-CGTTGTCAATCGTGTCCGATGACTCCACTTCCAACGTAATCGTCTTG 634198 Query 35708 CCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || |||| || ||||| || |||||||| Sbjct 634199 CCGGTCAGCGTCTTCACGAAAATCTGCAT 634227 Score = 116 bits (128), Expect = 3e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || || ||||||||||| | || || || |||| || ||||| || || ||||| Sbjct 634264 CTCTTTCTGGATGTTGTAATCAGACAGAGTGCGACCGTCTTCAAGCTGTTTTCCGGCAAA 634323 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| || || ||||| | ||||| || |||||||||| ||| || ||| | | | Sbjct 634324 GATCAAGCGTTGTTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATTTTCGCCTTGACATT 634383 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||||| ||||| ||||| | |||||| || || ||||||| || || || Sbjct 634384 ATCAATCGTGTCGGAAGATTCAACCTCGAGCGTGATGGTCTTGCCCGTCAGCGTCTTGAC 634443 Query 35725 AAATATCTGCAT 35736 ||| || ||||| Sbjct 634444 AAAAATTTGCAT 634455 >seq2 Length=1435055 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || || ||||||||||| | ||| ||||| | || || |||||||| || ||||| Sbjct 394630 CTCTTTCTGTATGTTGTAATCTGACAATGTTCGGCCATCCTCAAGCTGCTTGCCTGCAAA 394689 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| || || || || | ||||| | |||||| ||| |||||| ||| | | | Sbjct 394690 GATCAGACGTTGTTGATCAGGAGGAATACCCTCCTTATCCTGAATCTTTGCCTTGACATT 394749 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| ||||| || || | |||||||| || ||||||||||| || || Sbjct 394750 ATCGATGGTGTCAGAGGATTCGACTTCGAGGGTGATCGTCTTGCCCGTCAAAGTCTTGAC 394809 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 394810 GAAAATCTGCAT 394821 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450783727620160