Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq3 145 9e-30 seq21 100 4e-16 >seq3 Length=1746238 Score = 145 bits (160), Expect = 9e-30 Identities = 296/435 (68%), Gaps = 10/435 (2%) Strand=Plus/Minus Query 130016 GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 130075 ||||| ||| ||| || |||||||| ||| |||||||||||| ||||| ||||| Sbjct 1249473 GCAAAATCCGTGTGAAGGCCCTCGTCGCGGCTGATGAGTTCATTGGAGAACGTAAGACCA 1249414 Query 130076 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 130135 ||||| | ||||||||||| | |||||| || ||| ||| || |||||||| |||||| Sbjct 1249413 GGCATTAATCCCCGCTTCTTGATCCAGAAGATAGCAGCAAAAGACCCAGAGAAAAAGATC 1249354 Query 130136 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATC---A 130192 || || ||| ||||| |||| ||| || |||||||| | ||||| | ||| Sbjct 1249353 CCTTCTACAGCGGCGAAAGCAACGAGTCGTTCAGCAAAAG---TGGACTGTTGATCCGAT 1249297 Query 130193 AACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCA 130252 | ||| | | ||||| | || || || | ||| | || ||| | ||| || || Sbjct 1249296 ATCCATCTGAGAGCCCAATCAGCTTTACGCTTAACACATGAGATGGTTTCGATGGCGTCG 1249237 Query 130253 AAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTT 130312 || || | | |||| |||||| |||||||| |||| || ||| || || ||| Sbjct 1249236 AAAAGATGTGTGCGTTCTTCTGGATCCTTGATGTAGGTATCGATAAGTAAAGAGTACGTT 1249177 Query 130313 TCGCCATGGACCATTT--CATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTA 130370 || | | || ||||| ||| || || | ||||||| | || || || || Sbjct 1249176 TC-CGAGTGAACATTTTCCATCAT-AATTTGGAAGCCGTAGAAGCAACGTGCCTCAGCTA 1249119 Query 130371 TCTGTACCTCATCTGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAG 130430 |||||| ||| | ||| | | | || ||||||| || || || ||||| ||| Sbjct 1249118 TCTGTATTTCACTAGAAAACCTCTCAAGGAGATTCTCATTCACGATGCCGTCGGAAGCAG 1249059 Query 130431 CAAAAAACGCCAGGA 130445 ||||||| || |||| Sbjct 1249058 CAAAAAATGCGAGGA 1249044 >seq21 Length=1130388 Score = 100 bits (110), Expect = 4e-16 Identities = 154/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 118830 GCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 118889 ||||| |||||||||||| | || || ||||| |||||| || |||||| || | | Sbjct 175355 GCATCTTTGTAAAGCATGAAAGGTCCTCCTGTCTCTATTTGGGCCTCGAGAATCGCGTAC 175296 Query 118890 CAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTA 118948 |||| | || | ||| || ||| ||||| || ||| | |||||| || ||| | Sbjct 175295 CAGAGCTTCTG-AGCAGGAACAACCTTCTTGGCACGTTTCTCATTCTCGTATTTCGTGAA 175237 Query 118949 GAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAA 119008 ||| || ||||||||| | || | | || | || ||||| || | | |||||||| Sbjct 175236 GAGTGCCTCAAACTCTGCGCCATGGACGTCGGCAAGTCCTGGGGCTTCGTTAGGGCAGAA 175177 Query 119009 GAGAGACCATTGACCACCCTCCTCAACCCGCTTCATG 119045 ||| | ||| | ||||||| |||| || ||| ||||| Sbjct 175176 GAGTGGCCAGTCACCACCCGCCTCGACGCGCCTCATG 175140 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618421656269120