Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq3 113 5e-20 seq21 87.8 2e-12 seq2 86.0 7e-12 >seq3 Length=1746238 Score = 113 bits (124), Expect = 5e-20 Identities = 283/418 (68%), Gaps = 18/418 (4%) Strand=Plus/Minus Query 94529 TGGCATTCTTTGCTGGATCCGATGGAATTGTTTTTGAGAA---TATCAATAACAACTTTG 94585 |||| || ||||||| |||||||| || || || || | || | || |||| Sbjct 1247644 TGGCCTTTTTTGCTGCTTCCGATGGCATCGTCAACGAAAACCTTGTCGA--ACG-CTTTT 1247588 Query 94586 CTGATGAGGTGCAATCCTCTGAAGCGAGATCCTTCTATGCGTATCAGTGTCATAATG-AA 94644 | | || || || || ||||||| | | |||||||| | ||| |||| ||| || Sbjct 1247587 CCAACGAAGTTCAGGCCGCTGAAGCTCGCTGCTTCTATGGTTTTCAAA-TCATGATGGAA 1247529 Query 94645 ATGGTGCATGGGGAGACATACAGTAAACTCATAGACAAGTATATTAAGGATGGTGCTGAG 94704 | | ||| || || ||| | |||||||||| || || ||||| ||||| Sbjct 1247528 AACATTCATTCCGAAACGTACTCTCTCCTCATAGACACTTACATCAAGGACCAAGCTGAA 1247469 Query 94705 AAGAAGCAGCTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAG-CGGATTG 94763 || | || ||||| |||||| | || | || ||||| ||| | ||| | || || Sbjct 1247468 CGCGAGTATCTTTTTGATGCCATCGAGACCATCCCCTGTAT-CAAGCGTAAGGCTGAATG 1247410 Query 94764 GGCTATGAAGTGGTT---TGATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATT 94820 ||| | |||||| | ||| | || || | | || || || ||| | ||||||| Sbjct 1247409 GGCCCTCAAGTGGATATCTGACAAGAACTC---TACATTCGCCGAACGATTGGTCGCATT 1247353 Query 94821 TGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-CTATTTATTGGCTCAAGA 94879 ||| ||| || || |||||||| || || ||||| ||| | || | ||||||||||| Sbjct 1247352 TGCAGCTGTGGAAGGCATCTTCTTTTCAGGCTCCTT-TGCATCAATCTTTTGGCTCAAGA 1247294 Query 94880 AGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGG 94937 |||| ||||| ||||| || | |||||| || ||||||||| |||||| ||||| Sbjct 1247293 AGCGTGGTCTGATGCCTGGCTTAACCTTCTCAAATGAGCTTATCAGTCGTGATGAGGG 1247236 >seq21 Length=1130388 Score = 87.8 bits (96), Expect = 2e-12 Identities = 171/253 (68%), Gaps = 0/253 (0%) Strand=Plus/Plus Query 104229 ACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTCTTGGAGA 104288 ||||| ||||||| || || | || |||||||| || ||||||||| ||| | |||| Sbjct 174529 ACATGATCATGCGTGTTGCGGTTGGCATTCATGGTGATGACATTGATCGCGTCCTCGAGA 174588 Query 104289 CATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTG 104348 | || || ||||| | | |||| || || | || || ||||||||||| | Sbjct 174589 CGTATAACCTTATGTCTGAGCGCTACTTCACACATGCCTCGCCTACACTCTTCAATGCCG 174648 Query 104349 GTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCA 104408 ||||||| || ||| | | || |||||| || | ||||| || |||||| Sbjct 174649 GTACACCCCACCCACAACTTAGCTCGTGTTTCCTTGTCTGTATGAAGGACGATTCAATCG 174708 Query 104409 ACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTG 104468 | |||||||||| || || | | ||||||| || ||| ||||| ||||||| Sbjct 174709 ATGGTATCTATGATACCCTCAAGCAGTGTGCCATGATTAGCAAGACTGCTGGAGGTATTG 174768 Query 104469 GGATGCACATCCA 104481 | | ||||||| Sbjct 174769 GCCTCAACATCCA 174781 Score = 82.4 bits (90), Expect = 9e-11 Identities = 126/178 (71%), Gaps = 4/178 (2%) Strand=Plus/Plus Query 105767 ACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTC 105826 || |||||||| |||| |||| | || || ||| | || || ||||| ||| |||| Sbjct 176265 ACCGTTTGGGAGATCAGCCAGAAGAAGGTTATCGACCTCGCTGCTGATCGAGGTGCCTTC 176324 Query 105827 ATTGATCAAAGTCAAAGTATGAATCTCTTCATGGAAAGTCCAACGAT--GTCCAAGCTCT 105884 || || || || ||| ||||| || | || | || ||| | ||| |||| Sbjct 176325 ATCTGCCAGAGCCAGAGTTTGAATGTCCACTTGCAGGCGCCGACGCTTGGTC--AGCTGA 176382 Query 105885 CTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTACCTCCG 105942 | |||||| | ||| | ||||||||||||||||| || ||||||||||||||||| Sbjct 176383 CAAGCATGCACTTCTACGGCTGGAAGAAGGGTCTCAAGACAGGGATGTATTACCTCCG 176440 >seq2 Length=1435055 Score = 86.0 bits (94), Expect = 7e-12 Identities = 118/164 (72%), Gaps = 6/164 (4%) Strand=Plus/Plus Query 169328 GCATCGCGAACATTCTTACACTTCCCACGAAGAGGGAAGACACCGTAGTGATCACGACCA 169387 || |||||||||||| ||| ||||| ||||||||||||||| | | ||| | ||| Sbjct 199938 GCTTCGCGAACATTCAATAGCTTGCCACGGAGAGGGAAGACACCGAAATAATCCCTTCCA 199997 Query 169388 ACGACGGAGAGACCCGCGACTGCGAGAGTCTTCGCCGAGTCACCCTCGGTGACGATGAGC 169447 || ||| ||| |||||||| || |||| || || ||||| || || || | || || Sbjct 199998 ACAACGCCGAGGCCCGCGACAGCAAGAGCTTTGGCAGAGTCTCCTTCTGTCAAAATCAGA 200057 Query 169448 GTACA---TTTTCCAGATTGTGCCGTACCCGCCTTGTTCGCATC 169488 ||||| || ||| ||| ||||||||| || || || || Sbjct 200058 GTACAATCCTTCCCATATT---TCGTACCCGCGTTATTGGCGTC 200098 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583248026588480