Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq18 230 7e-55 seq2 181 3e-40 seq1 174 5e-38 seq39 104 7e-17 seq3 86.0 2e-11 >seq18 Length=654792 Score = 230 bits (254), Expect = 7e-55 Identities = 608/924 (66%), Gaps = 76/924 (8%) Strand=Plus/Minus Query 349531 ACCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTT 349590 ||| ||||||||||| || ||||| | | || ||||| || | ||||||| | || | Sbjct 486099 ACCTGAAGAAATTTCGTCCATGGTACTCCTCAAGATGAAAGAGACTGCTGAATCTTACCT 486040 Query 349591 AGGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCG 349650 || || ||| | | ||||| ||||||| || ||||| || |||||| ||||||| Sbjct 486039 CGGAACGACCGTATCCAACGCTGTCGTTACTGTCCCCGCCTACTTCAATGATTCCCAGCG 485980 Query 349651 TTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGA 349710 | || || || || || || | |||| | || || || ||||| | || || ||||| Sbjct 485979 TCAAGCGACCAAGGACGCCGGTACCATTTCTGGATTGAACGTTCTTCGTATCATCAATGA 485920 Query 349711 ACCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGAC-CAAGaaaaaaaTA 349769 ||||| ||||| || ||||| ||||| || || || | | ||||| ||| ||| Sbjct 485919 GCCCACAGCTGCTGCCATTGCTTATGGTCTCGACAAGAAG-GTGACTGGCGAACGCAATG 485861 Query 349770 TTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGG 349829 || | ||||| ||| | ||||| || ||||| ||||| ||||| || || |||| || | Sbjct 485860 TTTTGATTTTCGATCTCGGTGGAGGAACTTTCGATGTCTCACTTCTCACCATTGAGGAAG 485801 Query 349830 GAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATA 349889 | || || ||||| || || ||||| |||||||| || | ||||| |||||||| |||| Sbjct 485800 GTATCTTCGAAGTCAAGGCTACTGCCGGTGATACCCACTTGGGTGGTGAAGATTTCGATA 485741 Query 349890 ATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAG--CTAAAA---------- 349937 | |||||||| || |||||| | ||||| ||||| |||| | |||| Sbjct 485740 ACCGTCTCGTCAACCACTTTGTTCAGGAATTCAAGCG-CAAGAACAAAAAAGGTATGGCT 485682 Query 349938 ---------TTG-ATAT-------------------TGG-AGAT---------AATCCTA 349958 ||| |||| ||| |||| || ||| Sbjct 485681 CTTATCTCGTTGCATATCCAGATAGTATTGACGCGATGGTAGATCTGTCCTCGAACCCTC 485622 Query 349959 GAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTA 350018 | || | ||||| || | || || || || ||||| || || || | || ||| | Sbjct 485621 GTGCTGTTCGTCGTCTGCGTACCGCTTGCGAGCGTGCCAAACGCACCCTTTCCTCTGCCG 485562 Query 350019 CCCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTA 350078 | || || || ||||||||||| || ||| || |||| ||||||| | || ||| Sbjct 485561 CTCAGACATCCATTGAAATTGACTCGCTTTACGAGGGCATCGATTTCTACACTTCCCTTA 485502 Query 350079 CACGTGCTCGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGG 350138 | || ||||| |||||||| || ||| || ||||| | | || | || || || | Sbjct 485501 CCCGAGCTCGATTTGAAGAGTTGTGTCAAGACCTTTTCCGTGGCACGCTTGAACCGGTCG 485442 Query 350139 AAAAAGTATTAAAAGA-TGCAAAAATGTCCAAAAATC--AGATTGATGAAGTAGTTTTAG 350195 | || || || || | ||| | || | || || | || | || | ||| | | Sbjct 485441 AGAAGGTTCTACGTGACTCCAAGATTG---ACAAGTCCAATGTTCACGAGATTGTTCTTG 485385 Query 350196 TTGGTGGTTCTACACGTAT---TCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATG 350252 | |||||||| || ||||| || | ||| || | | || || || ||||| | Sbjct 485384 TCGGTGGTTCCACTCGTATCCCTCGTATCGTT---AAGCTTGTGTCCGACTTCTTTAACG 485328 Query 350253 GCAAAGAACCT-TCTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTT 350311 ||||||| ||| | ||| | || || || ||||| || ||||| ||||| || |||||| Sbjct 485327 GCAAAGAGCCTAACAAGAGC-ATCAACCCTGATGAGGCCGTTGCTTATGGAGCCGCTGTT 485269 Query 350312 CAGGCATCTATTTTATCTGGAAATA----AGAGTTCTAAAATTGATGATCTATTACTACT 350367 ||||| ||||| | ||||| ||| ||| || | | | ||||| | || || Sbjct 485268 CAGGCTGCTATTCTTTCTGGTGATACCTCGGAG----AAGACTCAGGATCTCCTGCTTCT 485213 Query 350368 AGATGTAACTCCACTTTCGCTTGG 350391 ||||| |||| || || ||||| Sbjct 485212 TGATGTTGCTCCTCTGTCCCTTGG 485189 Score = 87.8 bits (96), Expect = 5e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 183679 TATCAAAATCTTCACCACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATATTC 183738 |||| |||||||||||||| || || ||||| || |||||||| || ||||| || || | Sbjct 485741 TATCGAAATCTTCACCACCCAAGTGGGTATCACCGGCAGTAGCCTTGACTTCGAAGATAC 485800 Query 183739 CGTCTTCAATATTTAAAATTGATACATCAAATGTACCACCACCCAAATCAAAA 183791 | || ||||| | | || ||| ||||| || || || ||||| | ||| ||| Sbjct 485801 CTTCCTCAATGGTGAGAAGTGAGACATCGAAAGTTCCTCCACCGAGATCGAAA 485853 >seq2 Length=1435055 Score = 181 bits (200), Expect = 3e-40 Identities = 165/208 (79%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589 ||||||| ||||| |||||||| || || || ||||| || |||||||| ||||| |||| Sbjct 394614 CAAGATGCAGAGTCGACTCTTTCTGTATGTTGTAATCTGACAATGTTCGGCCATCCTCAA 394673 Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAA 140649 | || || || |||||||| |||||||| |||||||||||||| || || |||||||||| Sbjct 394674 GCTGCTTGCCTGCAAAGATCAGACGTTGTTGATCAGGAGGAATACCCTCCTTATCCTGAA 394733 Query 140650 TTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTC 140709 | || || || |||||||| || | ||||| | ||| ||||| || || | ||||| | Sbjct 394734 TCTTTGCCTTGACATTATCGATGGTGTCAGAGGATTCGACTTCGAGGGTGATCGTCTTGC 394793 Query 140710 CGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | || | || || || ||||||||||| Sbjct 394794 CCGTCAAAGTCTTGACGAAAATCTGCAT 394821 Score = 161 bits (178), Expect = 3e-34 Identities = 163/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || ||||| ||||| ||||| || || |||||||| || || || | || || ||||| Sbjct 394838 AGGACAAGGTGAAGTGTAGATTCCTTCTGAATATTGTAGTCGGAGAGAGTGCGGCCATCC 394897 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || |||||||| ||||| ||||| |||||||| || |||||||| || || || |||||| Sbjct 394898 TCGAGTTGTTTGCCAGCGAAGATAAGACGTTGTTGGTCAGGAGGGATGCCCTCCTTATCC 394957 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 ||||| || || || ||||| ||||| | ||| |||| || || || || || | ||| Sbjct 394958 TGAATCTTCGCCTTGACATTGTCAATGGTATCTGATGACTCGACCTCGAGAGTGATAGTC 395017 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || || || || ||||||||||| Sbjct 395018 TTGCCAGTAAGAGTCTTGACGAAAATCTGCAT 395049 Score = 100 bits (110), Expect = 9e-16 Identities = 99/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| || ||||| | | ||||| ||||| |||||||||||||| ||||| || || || Sbjct 395320 CATTCCGCCACGCAGGCGGAGAACTAGATGGAGAGTAGACTCTTTCTGAATGTTGTAGTC 395379 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| | |||| |||||| || | || || ||||| || || || ||||| |||||||| Sbjct 395380 AGAAAGCGTTCTCCCATCCTCTAACTGCTTCCCAGCGAAAATAAGGCGTTGTTGATCAGG 395439 Query 140627 AGGAATTC 140634 ||||||| Sbjct 395440 GGGAATTC 395447 >seq1 Length=1986796 Score = 174 bits (192), Expect = 5e-38 Identities = 177/231 (77%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||| || || | | ||||| ||||| || || |||||||| || || || ||||| Sbjct 634225 CATACCCCCGCGCAGACGCAGAACGAGATGCAGCGTCGACTCTTTCTGGATGTTGTAATC 634284 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| | || || || |||||||| |||||||| |||||||| | ||||| || ||||| Sbjct 634285 AGACAGAGTGCGACCGTCTTCAAGCTGTTTTCCGGCAAAGATCAAGCGTTGTTGGTCAGG 634344 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 |||||| || || || ||||| ||||| || || ||||||||||||| || || | ||| Sbjct 634345 AGGAATGCCCTCCTTGTCCTGGATTTTCGCCTTGACATTATCAATCGTGTCGGAAGATTC 634404 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||| || || || | ||||| || || || || || |||||||| ||||| Sbjct 634405 AACCTCGAGCGTGATGGTCTTGCCCGTCAGCGTCTTGACAAAAATTTGCAT 634455 Score = 143 bits (158), Expect = 8e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589 |||||||||| || || || || |||||||| || || || | ||| || || ||||||| Sbjct 634820 CAAGATGAAGGGTGGATTCCTTCTGAATATTGTAGTCTGAAAGTGTGCGACCGTCTTCAA 634879 Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAA 140649 |||| || || |||||||| | ||| || || || || || || ||||| || || || | Sbjct 634880 GTTGCTTGCCGGCAAAGATCAAACGCTGTTGGTCGGGGGGGATCCCTTCCTTGTCTTGGA 634939 Query 140650 TTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTC 140709 | || ||||| ||||| ||||| | |||||| | || || || || |||| ||||| | Sbjct 634940 TCTTGGCTTTGACATTGTCAATGGTATCAGAAGACTCCACCTCCAGGGTAATGGTCTTGC 634999 Query 140710 CGGTTAGTGTTTTTACAAAAATCTGCATT 140738 | || | || |||||||| || |||||| Sbjct 635000 CAGTCAAAGTCTTTACAAAGATTTGCATT 635028 Score = 141 bits (156), Expect = 3e-28 Identities = 156/208 (75%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589 ||||||| || || |||||||| |||||||| || || || | || || |||||||| | Sbjct 634527 CAAGATGGAGGGTGGACTCTTTCTGAATATTGTAGTCTGAGAGGGTGCGACCATCTTCGA 634586 Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAA 140649 | || || || || ||||| | || || ||||| ||||| || ||||| || ||||| | Sbjct 634587 GCTGCTTCCCGGCGAAGATCAAGCGCTGTTGATCGGGAGGGATGCCTTCCTTGTCCTGGA 634646 Query 140650 TTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTC 140709 |||| || || || |||||||| | ||| || | || || || || |||| ||||||| Sbjct 634647 TTTTGGCCTTGACGTTATCAATGGTATCGGACGACTCGACCTCGAGAGTAATGGTCTTTC 634706 Query 140710 CGGTTAGTGTTTTTACAAAAATCTGCAT 140737 |||| | || || ||||| || ||||| Sbjct 634707 CGGTCAAAGTCTTGACAAAGATTTGCAT 634734 Score = 134 bits (148), Expect = 4e-26 Identities = 145/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 140546 CTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAA 140605 ||| || || || || || ||||| | || | ||| |||||||| || || || ||||| Sbjct 634036 CTCCTTCTGGATGTTGTAGTCAGAAAGCGTCCTCCCGTCTTCAAGCTGCTTGCCCGCAAA 634095 Query 140606 GATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATT 140665 ||| || || ||||| ||||| ||||| ||||| || |||||||| || || || || || Sbjct 634096 GATCAGGCGCTGCTGGTCAGGCGGAATCCCTTCCTTGTCCTGAATCTTTGCCTTCACGTT 634155 Query 140666 ATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725 ||||||| || |||| || ||||| | |||| ||||| ||||| || || || || Sbjct 634156 GTCAATCGTGTCCGATGACTCCACTTCCAACGTAATCGTCTTGCCGGTCAGCGTCTTCAC 634215 Query 140726 AAAAATCTGCAT 140737 ||||||||||| Sbjct 634216 GAAAATCTGCAT 634227 >seq39 Length=420478 Score = 104 bits (114), Expect = 7e-17 Identities = 225/330 (68%), Gaps = 10/330 (3%) Strand=Plus/Plus Query 349621 TGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGC 349680 ||| || || || || || ||| | |||||| || || ||||||||||| |||||| Sbjct 212623 TGTTCCCGCATACTTCAACGATTCTCAGCGTCTGGCCACCAAAGATGCTGGTGCCATTGC 212682 Query 349681 GGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCT 349740 || | |||| || | || ||||| ||||| || ||||| || ||||| ||||| || Sbjct 212683 TGGCCTTGATGTCCTTCGTATCATTAACGAACCTACCGCTGCCGCCATTGCCTATGGTCT 212742 Query 349741 TGA---TAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTAC 349797 ||| | ||| | | || || || | || ||||| ||| | || || || || Sbjct 212743 TGACCGTCAAACAA---AAGCTGAGAAGAACGTCCTCATTTTCGATCTTGGAGGAGGAAC 212799 Query 349798 TTTTGATGTATCACTACT-AACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTG 349856 ||| ||||| || || | |||| | | || | || | || || |||||||| | Sbjct 212800 TTTCGATGTCTCCCTCTTGAACA-TCAGTGGTGGTGTCTTCGCTGTCAAGGCAACTGCGG 212858 Query 349857 GTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAG 349916 ||||||| ||||||||||| || || || || ||| ||| | ||| || || | Sbjct 212859 GTGATACCCATCTTGGTGGTGAGGACTTCGACAATGCGCTCTTGGAGCACTTCAAGAACG 212918 Query 349917 AATTTAAGCGTCAAG-CTAAAATTGATATT 349945 |||| ||||| |||| | || |||||||| Sbjct 212919 AATTCAAGCG-CAAGACCAAGCTTGATATT 212947 >seq3 Length=1746238 Score = 86.0 bits (94), Expect = 2e-11 Identities = 127/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 223741 TTCATTTGAAAATGTTAATCCAGGCATTAAACCTCTCTTTTTCATCCAAAATATTGCGCA 223800 |||||| || || || | ||||||||||| || | ||| || ||||| || || || Sbjct 1249435 TTCATTGGAGAACGTAAGACCAGGCATTAATCCCCGCTTCTTGATCCAGAAGATAGCAGC 1249376 Query 223801 AAAAGCTCCTGaaaaaaaTATACCTTCTACACAAGCAAACGCTACTAATCGTGTTGCAAA 223860 ||||| || || ||||| || ||||||||| || || || || | |||| ||||| Sbjct 1249375 AAAAGACCCAGAGAAAAAGATCCCTTCTACAGCGGCGAAAGCAACGAGTCGTTCAGCAAA 1249316 Query 223861 ATTTGAATCTTTGTCTCCTATCCATTTTAATGCCCAATCTGCTTTTTTCTTAATACAAGA 223920 | | || | || || ||||||| | | |||||||| ||||| ||||| ||| || Sbjct 1249315 AGTGGACTGTTGATCCGATATCCATCTGAGAGCCCAATCAGCTTTACGCTTAACACATGA 1249256 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515220386326856