Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq1 141 8e-29 seq2 100 2e-16 >seq1 Length=1986796 Score = 141 bits (156), Expect = 8e-29 Identities = 158/210 (75%), Gaps = 1/210 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || |||||||| ||| |||| |||||| | ||||| || || ||||| | || Sbjct 635027 ATGCAAATCTTTGTAAAGACTTTGACTGGCAAGACCATTACCCTGGAGGTGGAGTCTTCT 634968 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | |||||| || || |||||||| ||||| || || ||||| ||| Sbjct 634967 GATACCATTGACAATGTCAAAGCCAAGATCCAAGACAAGGAAGGGATCCCCCCCGACCAA 634908 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||||| || | |||||||| ||| | |||||| || || |||| || ||||| Sbjct 634907 CAGCGTTTGATCTTTGCCGGCAAGCAACTTGAAGACGGTCGCACACTTTCAGACTACAAT 634848 Query 27168 ATTCAAAAGGAGTCGACCTTACAT-TTGGT 27196 ||||| ||||| || ||| | ||| ||||| Sbjct 634847 ATTCAGAAGGAATCCACCCTTCATCTTGGT 634818 Score = 136 bits (150), Expect = 3e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| || || ||||| |||||| | || || || || || ||| | ||| Sbjct 634455 ATGCAAATTTTTGTCAAGACGCTGACGGGCAAGACCATCACGCTCGAGGTTGAATCTTCC 634396 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| ||||||| | ||||| ||||| || ||||| || ||||| || || || ||| Sbjct 634395 GACACGATTGATAATGTCAAGGCGAAAATCCAGGACAAGGAGGGCATTCCTCCTGACCAA 634336 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || || || || | ||||| ||||| | |||||| || || | || ||||||||| Sbjct 634335 CAACGCTTGATCTTTGCCGGAAAACAGCTTGAAGACGGTCGCACTCTGTCTGATTACAAC 634276 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || || |||||||| | ||| | ||| ||||| |||| || || || Sbjct 634275 ATCCAGAAAGAGTCGACGCTGCATCTCGTTCTGCGTCTGCGCGGGGGTAT 634226 Score = 136 bits (150), Expect = 3e-27 Identities = 157/210 (75%), Gaps = 1/210 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| || ||| ||||||| ||| | |||||||| || || || ||||| Sbjct 634734 ATGCAAATCTTTGTCAAGACTTTGACCGGAAAGACCATTACTCTCGAGGTCGAGTCGTCC 634675 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | ||||| ||||| || ||||| |||||||| || ||||||||| Sbjct 634674 GATACCATTGATAACGTCAAGGCCAAAATCCAGGACAAGGAAGGCATCCCTCCCGATCAA 634615 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| || || | |||||| || || | ||||| || ||| | || || ||||| Sbjct 634614 CAGCGCTTGATCTTCGCCGGGAAGCAGCTCGAAGATGGTCGCACCCTCTCAGACTACAAT 634555 Query 27168 ATTCAAAAGGAGTCGACCTTACAT-TTGGT 27196 ||||| || ||||| ||| | ||| ||||| Sbjct 634554 ATTCAGAAAGAGTCCACCCTCCATCTTGGT 634525 Score = 114 bits (126), Expect = 1e-20 Identities = 150/208 (72%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||||||||||| | ||||| | |||||||| | || Sbjct 634227 ATGCAGATTTTCGTGAAGACGCTGACCGGCAAGACGATTACGTTGGAAGTGGAGTCATCG 634168 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| ||||||| | || || ||| ||||| ||||| ||||| || || || || || Sbjct 634167 GACACGATTGACAACGTGAAGGCAAAGATTCAGGACAAGGAAGGGATTCCGCCTGACCAG 634108 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | || ||||| || | |||||| | ||| |||| || |||||| Sbjct 634107 CAGCGCCTGATCTTTGCGGGCAAGCAGCTTGAAGACGGGAGGACGCTTTCTGACTACAAC 634048 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGG 27195 || || |||||| || || ||| ||| Sbjct 634047 ATCCAGAAGGAGAGCACGTTGCATCTGG 634020 >seq2 Length=1435055 Score = 100 bits (110), Expect = 2e-16 Identities = 151/211 (72%), Gaps = 3/211 (1%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||| |||| |||||| | || || || ||||| ||| | || Sbjct 394821 ATGCAGATTTTCGTCAAGACTTTGACGGGCAAGACGATCACCCTCGAAGTCGAATCCTCT 394762 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| ||| ||||| || || || || || || || |||||| Sbjct 394761 GACACCATCGATAATGTCAAGGCAAAGATTCAGGATAAGGAGGGTATTCCTCCTGATCAA 394702 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTT-TCCGATTACAA 27166 || ||| | || | || ||||| || | || || | ||| | || || |||||||| Sbjct 394701 CAACGTCTGATCTTTGCAGGCAAGCAGCTTGAGGATGGC-CGAACATTGTCAGATTACAA 394643 Query 27167 CATTCAAAAGGAGTCGACCTTACAT-TTGGT 27196 ||| || || |||||||| | ||| ||||| Sbjct 394642 CATACAGAAAGAGTCGACTCTGCATCTTGGT 394612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434908875287040