Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq2 181 2e-40 seq1 161 2e-34 seq20 95.1 3e-14 seq7 84.2 5e-11 >seq2 Length=1435055 Score = 181 bits (200), Expect = 2e-40 Identities = 165/208 (79%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 210907 CAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCA 210966 |||| || ||||| |||||||| || ||||| ||||| | | || | ||||| || | Sbjct 394614 CAAGATGCAGAGTCGACTCTTTCTGTATGTTGTAATCTGACAATGTTCGGCCATCCTCAA 394673 Query 210967 GCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGA 211026 ||||||||||||| ||||| || |||||||| |||||||||| || ||||| ||||| | Sbjct 394674 GCTGCTTGCCTGCAAAGATCAGACGTTGTTGATCAGGAGGAATACCCTCCTTATCCTGAA 394733 Query 211027 TCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTC 211086 ||||| || || || ||||||||||||||| ||| || ||||| ||||||||||| | Sbjct 394734 TCTTTGCCTTGACATTATCGATGGTGTCAGAGGATTCGACTTCGAGGGTGATCGTCTTGC 394793 Query 211087 CCGTGAGAGTCTTTACAAACACCTGCAT 211114 |||| | |||||| || || | |||||| Sbjct 394794 CCGTCAAAGTCTTGACGAAAATCTGCAT 394821 Score = 152 bits (168), Expect = 1e-31 Identities = 161/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 |||||||||||||| || || || || || || || || || | || || | ||||| Sbjct 394838 AGGACAAGGTGAAGTGTAGATTCCTTCTGAATATTGTAGTCGGAGAGAGTGCGGCCATCC 394897 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || || ||||| ||||||||||| ||||||||||||||||| | || ||||| ||| Sbjct 394898 TCGAGTTGTTTGCCAGCGAAGATAAGACGTTGTTGGTCAGGAGGGATGCCCTCCTTATCC 394957 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || || || || ||||| || || || |||||||||||||| ||| Sbjct 394958 TGAATCTTCGCCTTGACATTGTCAATGGTATCTGATGACTCGACCTCGAGAGTGATAGTC 395017 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || |||||||| || || | |||||| Sbjct 395018 TTGCCAGTAAGAGTCTTGACGAAAATCTGCAT 395049 Score = 93.3 bits (102), Expect = 1e-13 Identities = 86/109 (79%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || || || ||||| |||||||| || ||||| || || | ||| || || ||||| Sbjct 395339 AGAACTAGATGGAGAGTAGACTCTTTCTGAATGTTGTAGTCAGAAAGCGTTCTCCCATCC 395398 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTC 211011 || | |||||| || ||||| |||||||||||||| ||||| |||| || Sbjct 395399 TCTAACTGCTTCCCAGCGAAAATAAGGCGTTGTTGATCAGGGGGAATTC 395447 >seq1 Length=1986796 Score = 161 bits (178), Expect = 2e-34 Identities = 163/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || || || || || |||||||| |||||||| ||||| | || || | || ||| Sbjct 634244 AGAACGAGATGCAGCGTCGACTCTTTCTGGATGTTGTAATCAGACAGAGTGCGACCGTCT 634303 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||| || || || ||||| | |||||||||||||||||||| || ||||||||| Sbjct 634304 TCAAGCTGTTTTCCGGCAAAGATCAAGCGTTGTTGGTCAGGAGGAATGCCCTCCTTGTCC 634363 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||| || || || || || || ||||| || |||||||||||| ||||| ||| Sbjct 634364 TGGATTTTCGCCTTGACATTATCAATCGTGTCGGAAGATTCAACCTCGAGCGTGATGGTC 634423 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| || ||||| ||||| | ||||| Sbjct 634424 TTGCCCGTCAGCGTCTTGACAAAAATTTGCAT 634455 Score = 154 bits (170), Expect = 3e-32 Identities = 159/208 (76%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 210907 CAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCA 210966 |||| || || ||||||||||| || || || || || | ||||| | |||||||| | Sbjct 634527 CAAGATGGAGGGTGGACTCTTTCTGAATATTGTAGTCTGAGAGGGTGCGACCATCTTCGA 634586 Query 210967 GCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGA 211026 ||||||| || |||||||| | ||| ||||| || ||||| | |||||||||||||||| Sbjct 634587 GCTGCTTCCCGGCGAAGATCAAGCGCTGTTGATCGGGAGGGATGCCTTCCTTGTCCTGGA 634646 Query 211027 TCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTC 211086 | || || ||||| || ||||| || || || ||||||||||| || ||||||| Sbjct 634647 TTTTGGCCTTGACGTTATCAATGGTATCGGACGACTCGACCTCGAGAGTAATGGTCTTTC 634706 Query 211087 CCGTGAGAGTCTTTACAAACACCTGCAT 211114 | || | |||||| ||||| | ||||| Sbjct 634707 CGGTCAAAGTCTTGACAAAGATTTGCAT 634734 Score = 149 bits (164), Expect = 1e-30 Identities = 148/192 (77%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 210923 CTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAA 210982 ||| || |||||||| || || | ||| ||||| || ||||| ||||||||||| || || Sbjct 634036 CTCCTTCTGGATGTTGTAGTCAGAAAGCGTCCTCCCGTCTTCAAGCTGCTTGCCCGCAAA 634095 Query 210983 GATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTT 211042 ||| ||||| || |||||||| |||| |||||||||||||| |||||| |||||||| Sbjct 634096 GATCAGGCGCTGCTGGTCAGGCGGAATCCCTTCCTTGTCCTGAATCTTTGCCTTCACGTT 634155 Query 211043 TTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTAC 211102 || || ||||| || || || || | || |||||||| || || || ||||| || Sbjct 634156 GTCAATCGTGTCCGATGACTCCACTTCCAACGTAATCGTCTTGCCGGTCAGCGTCTTCAC 634215 Query 211103 AAACACCTGCAT 211114 || | |||||| Sbjct 634216 GAAAATCTGCAT 634227 Score = 134 bits (148), Expect = 3e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 210907 CAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCA 210966 |||| ||||| ||||| || || || || || || || | ||| || | || ||||| | Sbjct 634820 CAAGATGAAGGGTGGATTCCTTCTGAATATTGTAGTCTGAAAGTGTGCGACCGTCTTCAA 634879 Query 210967 GCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGA 211026 | |||||||| || ||||| | || |||||||| || || | ||||||||||| |||| Sbjct 634880 GTTGCTTGCCGGCAAAGATCAAACGCTGTTGGTCGGGGGGGATCCCTTCCTTGTCTTGGA 634939 Query 211027 TCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTC 211086 |||| ||| || || || ||||| ||||| || ||||| || || || ||||| | Sbjct 634940 TCTTGGCTTTGACATTGTCAATGGTATCAGAAGACTCCACCTCCAGGGTAATGGTCTTGC 634999 Query 211087 CCGTGAGAGTCTTTACAAACACCTGCATT 211115 | || | |||||||||||| | |||||| Sbjct 635000 CAGTCAAAGTCTTTACAAAGATTTGCATT 635028 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || |||||||| | ||||| || || ||||||||||| || | ||| || | |||||| Sbjct 635044 AGCACAAGGTGCAAGGTGGATTCCTTCTGGATGTTATAGTCGGAAAGCGTGCGGCCATCT 635103 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGG 211006 || ||||| || || |||||||| || || || ||||||||||| Sbjct 635104 TCGAGCTGTTTACCAGCGAAGATGAGACGCTGCTGGTCAGGAGG 635147 >seq20 Length=1067518 Score = 95.1 bits (104), Expect = 3e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 |||||||||||||| || || || || || |||||||||||||| || |||||| Sbjct 158414 CCTTCCTTGTCCTGAATTTTGGCCTTGACATTGTCGATGGTGTCAGACGACTCGACCTCG 158473 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || ||||||||||| |||||||| ||||| || || | |||||| || Sbjct 158474 AGGGTGATCGTCTTACCCGTGAGGGTCTTGACGAAAATCTGCATCTT 158520 >seq7 Length=1106505 Score = 84.2 bits (92), Expect = 5e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || |||||||| || ||||| || || ||||| || || |||||| | ||||| Sbjct 360727 AGCACCAGGTGAAGGGTAGACTCCTTCTGAATGTTGTAGTCACTAAGGGTACGGCCATCC 360786 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGG 211006 || ||||||||||| ||||| || ||||| || ||||| ||||| Sbjct 360787 TCAAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGAGG 360830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159125979935480