Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq1 102 7e-17 >seq1 Length=1986796 Score = 102 bits (112), Expect = 7e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 39081 ATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTG 39140 ||| ||||| |||||| || || || ||||| | || || || |||| |||||||| Sbjct 634252 ATGCAGCGTCGACTCTTTCTGGATGTTGTAATCAGACAGAGTGCGACCGTCTTCAAGCTG 634311 Query 39141 TTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTT 39200 ||| || ||||| || | || || ||||| | || | || ||| |||||| |||||| Sbjct 634312 TTTTCCGGCAAAGATCAAGCGTTGTTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATTTT 634371 Query 39201 CTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGT 39260 | |||| | | | ||| ||| || || || || | |||||| | || ||||| Sbjct 634372 CGCCTTGACATTATCAATCGTGTCGGAAGATTCAACCTCGAGCGTGATGGTCTTGCCCGT 634431 Query 39261 CAGCGTTTTAACAAAGATTTGCAT 39284 |||||| || ||||| |||||||| Sbjct 634432 CAGCGTCTTGACAAAAATTTGCAT 634455 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/209 (71%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 39077 CCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAA 39136 ||| ||| | ||||||||| || || || || || || | ||| || | |||| |||| Sbjct 634020 CCAGATGCAACGTGCTCTCCTTCTGGATGTTGTAGTCAGAAAGCGTCCTCCCGTCTTCAA 634079 Query 39137 GCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGA 39196 |||| ||||||||||| || || ||||||||||| | || | | || |||||| ||| Sbjct 634080 GCTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCAGGCGGAATCCCTTCCTTGTCC-TGA 634138 Query 39197 TTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTT 39255 | | || | ||| | | | ||| || |||||||| |||| ||| || | || Sbjct 634139 ATCTTTGCCTTCACGTTGTCAATCGTGTCCGATGACTCCACTTCCAACGTAATCGTCTTG 634198 Query 39256 CCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || |||||||| || || || || ||||| Sbjct 634199 CCGGTCAGCGTCTTCACGAAAATCTGCAT 634227 Score = 91.5 bits (100), Expect = 1e-13 Identities = 147/210 (70%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 39076 ACCAA-ATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 ||||| ||| || ||| || || || ||||| || || | |||||| || |||| || Sbjct 634818 ACCAAGATGAAGGGTGGATTCCTTCTGAATATTGTAGTCTGAAAGTGTGCGACCGTCTTC 634877 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 ||| || ||||| ||||| || | |||||| ||||||| ||| | | || ||||| Sbjct 634878 AAGTTGCTTGCCGGCAAAGATCAAACGCTGTTGGTCGGGGGGGATCCCTTCCTTGTCTTG 634937 Query 39195 GATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 ||| || ||||| | | | ||||| |||||||| |||| || || | || Sbjct 634938 GATCTTGGCTTTGACATTGTCAATGGTATCAGAAGACTCCACCTCCAGGGTAATGGTCTT 634997 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || |||| || || |||||||||||||| Sbjct 634998 GCCAGTCAAAGTCTTTACAAAGATTTGCAT 635027 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429536428127576