Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq2 192 1e-43 seq1 187 5e-42 seq20 96.9 7e-15 seq94 89.7 1e-12 >seq2 Length=1435055 Score = 192 bits (212), Expect = 1e-43 Identities = 157/191 (82%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 ||||| || |||||||| || | | || ||||||||||| || || || || |||||| Sbjct 394631 TCTTTCTGTATGTTGTAATCTGACAATGTTCGGCCATCCTCAAGCTGCTTGCCTGCAAAG 394690 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 |||| ||||||||| ||| |||||||||||||| || || |||||||| || || || Sbjct 394691 ATCAGACGTTGTTGATCAGGAGGAATACCCTCCTTATCCTGAATCTTTGCCTTGACATTA 394750 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 ||||| ||||| || | |||||||||||| ||||||||||| |||||||||||||| ||| Sbjct 394751 TCGATGGTGTCAGAGGATTCGACTTCGAGGGTGATCGTCTTGCCCGTCAAAGTCTTGACG 394810 Query 283089 AATATCTGCAT 283099 || |||||||| Sbjct 394811 AAAATCTGCAT 394821 Score = 154 bits (170), Expect = 3e-32 Identities = 165/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 282882 AGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGG 282941 || ||||| || || || | || ||| || || || |||||||| | || |||||| Sbjct 394832 AGCCGAAGGACAAGGTGAAGTGTAGATTCCTTCTGAATATTGTAGTCGGAGAGAGTGCGG 394891 Query 282942 CCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCC 283001 |||||||| |||||||| || || ||||| | ||||||||||||| || || |||||| Sbjct 394892 CCATCCTCGAGTTGTTTGCCAGCGAAGATAAGACGTTGTTGGTCAGGAGGGATGCCCTCC 394951 Query 283002 TTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTG 283061 || || || ||||| || || || | || || || || || | ||||| ||||||||| Sbjct 394952 TTATCCTGAATCTTCGCCTTGACATTGTCAATGGTATCTGATGACTCGACCTCGAGAGTG 395011 Query 283062 ATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || ||||| || || | |||||| ||||| |||||||| Sbjct 395012 ATAGTCTTGCCAGTAAGAGTCTTGACGAAAATCTGCAT 395049 Score = 96.9 bits (106), Expect = 7e-15 Identities = 179/273 (66%), Gaps = 45/273 (16%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || |||||||||||||| || ||||| | || ||| || ||||| || ||||| | Sbjct 395051 CCGCCACGCAGGCGAAGGACAAGATGCAGGGTCGATTCCTTCTGGATATTATAGTCGGAG 395110 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCA------ 282986 || || | |||||||| || ||||| ||||||||||| | ||| |||||||| Sbjct 395111 AGTGTTCTACCATCCTCAAGCTGTTTGCCGGCAAAGATGAGACGCTGTTGGTCGGGAGGG 395170 Query 282987 --CCCGGA-------------------ATA------------------CCCTCCTTGTCT 283007 || ||| ||| ||||| ||||| Sbjct 395171 ATCCTGGAGACAGATTAGTTGTGTAAAATAAAAACGATTCAAACTGACCCCTCTTTGTCC 395230 Query 283008 TGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTC 283067 || ||||| || || ||| | |||||||||||||| | ||| ||||| | ||||||||| Sbjct 395231 TGAATCTTGGCCTTCACGTTGTCGATAGTGTCCGATGATTCAACTTCCAACGTGATCGTC 395290 Query 283068 TTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 || || || | ||||| ||||| ||||||||| Sbjct 395291 TTCCCTGTGAGTGTCTTGACGAAGATCTGCATT 395323 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055 |||||||||||||| ||||| || || || |||| || ||||| |||| |||||||| Sbjct 395501 CCCTCCTTGTCTTGAATCTTAGCCTTGACATTATCAATGGTGTCTGAAGACTCGACTTCA 395560 Query 283056 AGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || ||||| ||||| || || | ||||| ||||| || ||||| Sbjct 395561 AGGGTGATTGTCTTTCCGGTGAGGGTCTTTACGAAGATTTGCAT 395604 Score = 86.0 bits (94), Expect = 1e-11 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || ||||||||||| || || ||||| | || ||||| || ||||||||||||| | Sbjct 395324 CCGCCACGCAGGCGGAGAACTAGATGGAGAGTAGACTCTTTCTGAATGTTGTAGTCAGAA 395383 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 ||||| | |||||||||| || ||||| || || || | |||||||| ||| ||| Sbjct 395384 AGCGTTCTCCCATCCTCTAACTGCTTCCCAGCGAAAATAAGGCGTTGTTGATCAGGGGGA 395443 Query 282993 AT 282994 || Sbjct 395444 AT 395445 >seq1 Length=1986796 Score = 187 bits (206), Expect = 5e-42 Identities = 178/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| || ||||| || || || ||||| | ||| ||||| ||||||||||| |||| Sbjct 634228 ACCCCCGCGCAGACGCAGAACGAGATGCAGCGTCGACTCTTTCTGGATGTTGTAATCAGA 634287 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||| || || || || ||||| |||||||||||||| |||||||||||| || Sbjct 634288 CAGAGTGCGACCGTCTTCAAGCTGTTTTCCGGCAAAGATCAAGCGTTGTTGGTCAGGAGG 634347 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| ||||| || || || || |||| || ||||| |||| ||| || Sbjct 634348 AATGCCCTCCTTGTCCTGGATTTTCGCCTTGACATTATCAATCGTGTCGGAAGATTCAAC 634407 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||| ||||| ||||||| ||||| || || || ||||| Sbjct 634408 CTCGAGCGTGATGGTCTTGCCCGTCAGCGTCTTGACAAAAATTTGCAT 634455 Score = 172 bits (190), Expect = 1e-37 Identities = 163/208 (78%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 282892 CCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTA 282951 ||||||| |||||||| || || |||||||||||||||| |||||| | || || || | Sbjct 634020 CCAGATGCAACGTGCTCTCCTTCTGGATGTTGTAGTCAGAAAGCGTCCTCCCGTCTTCAA 634079 Query 282952 GTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGA 283011 | || || || |||||||||| || || |||||| |||||| || |||||||| || | Sbjct 634080 GCTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCAGGCGGAATCCCTTCCTTGTCCTGAA 634139 Query 283012 TCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTAC 283071 ||||||| || ||| | || || |||||||| | || ||||| | || |||||||| | Sbjct 634140 TCTTTGCCTTCACGTTGTCAATCGTGTCCGATGACTCCACTTCCAACGTAATCGTCTTGC 634199 Query 283072 CCGTCAAAGTCTTAACGAATATCTGCAT 283099 | |||| ||||| ||||| |||||||| Sbjct 634200 CGGTCAGCGTCTTCACGAAAATCTGCAT 634227 Score = 156 bits (172), Expect = 9e-33 Identities = 163/213 (77%), Gaps = 1/213 (0%) Strand=Plus/Plus Query 282889 GTACCA-GATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCC 282947 |||||| |||| | ||| ||| || || || |||||||| | ||| ||||| || || Sbjct 634816 GTACCAAGATGAAGGGTGGATTCCTTCTGAATATTGTAGTCTGAAAGTGTGCGACCGTCT 634875 Query 282948 TCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCT 283007 || ||||| || ||||||||||||||||| |||||||| || || || ||||||||| Sbjct 634876 TCAAGTTGCTTGCCGGCAAAGATCAAACGCTGTTGGTCGGGGGGGATCCCTTCCTTGTCT 634935 Query 283008 TGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTC 283067 |||||||| ||||| || | || || || || |||| || || || || || || ||| Sbjct 634936 TGGATCTTGGCTTTGACATTGTCAATGGTATCAGAAGACTCCACCTCCAGGGTAATGGTC 634995 Query 283068 TTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 || || ||||||||||| || || || |||||| Sbjct 634996 TTGCCAGTCAAAGTCTTTACAAAGATTTGCATT 635028 Score = 145 bits (160), Expect = 2e-29 Identities = 160/212 (75%), Gaps = 1/212 (0%) Strand=Plus/Plus Query 282889 GTACCA-GATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCC 282947 |||||| |||| | ||| ||||| || || |||||||| | || ||||| ||||| Sbjct 634523 GTACCAAGATGGAGGGTGGACTCTTTCTGAATATTGTAGTCTGAGAGGGTGCGACCATCT 634582 Query 282948 TCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCT 283007 || || || |||||||| |||||||| || ||||| || || || || |||||||| Sbjct 634583 TCGAGCTGCTTCCCGGCGAAGATCAAGCGCTGTTGATCGGGAGGGATGCCTTCCTTGTCC 634642 Query 283008 TGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTC 283067 ||||| || || || ||| |||| || || || || | ||||| |||||||| || ||| Sbjct 634643 TGGATTTTGGCCTTGACGTTATCAATGGTATCGGACGACTCGACCTCGAGAGTAATGGTC 634702 Query 283068 TTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||||||||| || || || ||||| Sbjct 634703 TTTCCGGTCAAAGTCTTGACAAAGATTTGCAT 634734 Score = 98.7 bits (108), Expect = 2e-15 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055 |||||||||||||||||||| ||||| || ||||||| ||||| |||| ||||| || Sbjct 635206 CCCTCCTTGTCTTGGATCTTGGCTTTGACATTATCGATGGTGTCGGAAGACTCGACCTCA 635265 Query 283056 AGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || || ||||| || ||||| || || ||||| || ||||| Sbjct 635266 AGGGTAATGGTCTTTCCGGTCAAGGTTTTCACGAAGATTTGCAT 635309 Score = 89.7 bits (98), Expect = 1e-12 Identities = 88/114 (77%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| || || || || || || || || ||| ||| || |||||||| ||||| | | Sbjct 635029 CCACCGCGGAGACGGAGCACAAGGTGCAAGGTGGATTCCTTCTGGATGTTATAGTCGGAA 635088 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCA 282986 |||||||||||||| || || ||||| || || ||||| | ||| || |||||| Sbjct 635089 AGCGTGCGGCCATCTTCGAGCTGTTTACCAGCGAAGATGAGACGCTGCTGGTCA 635142 >seq20 Length=1067518 Score = 96.9 bits (106), Expect = 7e-15 Identities = 74/88 (84%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || || || |||||||||||| || || ||||||||||| ||||| || ||||||||| Sbjct 158277 TCCTTCTGAATGTTGTAGTCACTCAGAGTACGGCCATCCTCAAGTTGCTTTCCGGCAAAG 158336 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATAC 282996 |||||||||||||||||| ||||||| Sbjct 158337 ATCAAACGTTGTTGGTCAGGGGGAATAC 158364 Score = 89.7 bits (98), Expect = 1e-12 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055 || |||||||| || || || || || || | ||||| ||||| || | ||||| ||| Sbjct 158414 CCTTCCTTGTCCTGAATTTTGGCCTTGACATTGTCGATGGTGTCAGACGACTCGACCTCG 158473 Query 283056 AGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || ||||||||||||||||| | ||||| ||||| |||||||| || Sbjct 158474 AGGGTGATCGTCTTACCCGTGAGGGTCTTGACGAAAATCTGCATCTT 158520 >seq94 Length=248064 Score = 89.7 bits (98), Expect = 1e-12 Identities = 134/186 (72%), Gaps = 6/186 (3%) Strand=Plus/Plus Query 43983 CCAAGCGTCGACATCGGAGTTGTACGGAAAGGTTCAGGAGATTCCTCAAACAGAAAGGAC 44042 ||| ||||| || || || || |||||||||||| |||| || |||| || | ||| Sbjct 196235 CCAGGCGTCCACGTCCGAATTATACGGAAAGGTTGTCGAGACACCACAAAGCGAGACGAC 196294 Query 44043 TCCGTTTTATCCCCGGAGTCCATATGG-TGTGGCGAAGCTATATGCCTATTGGAT--TTG 44099 || || || || || ||||||||| ||| || ||||| || || | |||||| | | Sbjct 196295 ACCCTTCTACCCTCGCTCTCCATATGGCTGT-GCCAAGCTCTACGCATTTTGGATCGTCG 196353 Query 44100 TAAAAATTATCGCGAGTCGTATGGGATGTTCGTTTGTAATTCGATTTGTTTCAATCACGA 44159 | || |||||||||||||| ||||||| || ||| ||| ||| || || ||||| Sbjct 196354 T--CAACTATCGCGAGTCGTACGGGATGTACGCTTGCAATGGGATCCTCTTTAACCACGA 196411 Query 44160 AAGTCC 44165 || || Sbjct 196412 GAGCCC 196417 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046715703321808