Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq3 143 3e-29 >seq3 Length=1746238 Score = 143 bits (158), Expect = 3e-29 Identities = 353/534 (66%), Gaps = 5/534 (1%) Strand=Plus/Minus Query 23500 AACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAA 23559 ||||| | |||||||||||| || ||||| || || | || || | |||||| || Sbjct 1249485 AACAACAGACATGCAAAATCCGTGTGAAGGCCCTCGTCGCGGCTGATGAGTTCATTGGAG 1249426 Query 23560 AATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCG 23619 || || | || ||||||||||| || || || ||||| || || |||||||| || || Sbjct 1249425 AACGTAAGACCAGGCATTAATCCCCGCTTCTTGATCCAGAAGATAGCAGCAAAAGACCCA 1249366 Query 23620 GAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTA 23679 || || || || || || ||||| || || || || || ||| | |||| || | | Sbjct 1249365 GAGAAAAAGATCCCTTCTACAGCGGCGAAAGCAACGAGTCGTTCAGCAAAAGTGGACTGT 1249306 Query 23680 TAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCA 23739 | ||| || |||||| | | ||||| ||| || || ||||| || ||||| Sbjct 1249305 TGATCCGATATCCATCTGAGAGCCCAATCAGCTTTACGCTTAACACATGAGATGGTTTCG 1249246 Query 23740 ATTGCTTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAA 23799 || || | || ||| || |||||| ||| | || || ||||| || |||||| Sbjct 1249245 ATGGCGTCGAAAAGATGTGTGCGTTCTTCTGGATCCTTGATGTAGGTATCGATAAGTAAA 1249186 Query 23800 CTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCT 23859 ||| |||| || |||| |||||| || ||| || || || || || || | || Sbjct 1249185 GAGTACGTTTCCGAGTGAACATTTTCCATCATAATTTGGAAGCCGTAGAAGCAACGTGCC 1249126 Query 23860 TCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCA 23919 |||| | || | ||| || |||| || | | | ||| || || || || || || Sbjct 1249125 TCAGCTATCTGTATTTCACTAGAAAACCTCTCAAGGAGATTCTCATTCACGATGCCGTCG 1249066 Query 23920 CTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGATAATTTT 23979 ||||||||| || || || || | || |||| || ||| | | | ||| ||| Sbjct 1249065 GAAGCAGCAAAAAATGCGAGGACGTGGGAAATGAAATATCGTTCGT-TGGAGTTAAGTTT 1249007 Query 23980 ----TTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAA 24029 |||||||| | | ||| | | | ||| | ||| || |||||||||| Sbjct 1249006 ATAGTTCCAATCCATGAGATCATGACAGAGATCTATTTCTTCGGCTGTCCAAAA 1248953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521476579412800