Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq1 136 3e-27 seq2 104 2e-17 >seq1 Length=1986796 Score = 136 bits (150), Expect = 3e-27 Identities = 155/208 (75%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 44130 CCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCA 44189 |||| || | |||||||||||| ||||||||||| || | || | | |||| || | Sbjct 634020 CCAGATGCAACGTGCTCTCCTTCTGGATGTTGTAGTCAGAAAGCGTCCTCCCGTCTTCAA 634079 Query 44190 GCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTA 44249 ||||||| || |||||||||| |||||||| || | || | |||||||| ||| | Sbjct 634080 GCTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCAGGCGGAATCCCTTCCTTGTCCTGAA 634139 Query 44250 TCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTC 44309 |||| ||||| | | || ||||| | || ||||| |||| |||||||||||| | Sbjct 634140 TCTTTGCCTTCACGTTGTCAATCGTGTCCGATGACTCCACTTCCAACGTAATCGTCTTGC 634199 Query 44310 CCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || || ||||||||||| || ||||| Sbjct 634200 CGGTCAGCGTCTTCACGAAAATCTGCAT 634227 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| ||||| | ||| | || || || || ||||| ||| || |||||||||||||| Sbjct 634225 CATACCCCCGCGCAGACGCAGAACGAGATGCAGCGTCGACTCTTTCTGGATGTTGTAATC 634284 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || ||| |||| || ||||| || |||||||||||||| || || || || | Sbjct 634285 AGACAGAGTGCGACCGTCTTCAAGCTGTTTTCCGGCAAAGATCAAGCGTTGTTGGTCAGG 634344 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 ||| | || ||||| ||| || ||| ||| | | | || ||||||| ||||| Sbjct 634345 AGGAATGCCCTCCTTGTCCTGGATTTTCGCCTTGACATTATCAATCGTGTCGGAAGATTC 634404 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| | ||| || ||||| ||||| || ||||| || || |||||||| Sbjct 634405 AACCTCGAGCGTGATGGTCTTGCCCGTCAGCGTCTTGACAAAAATTTGCAT 634455 Score = 113 bits (124), Expect = 3e-20 Identities = 152/209 (73%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 44132 AGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGC 44191 || ||||| ||| ||||| || || ||||| || | ||| ||| |||| || || Sbjct 634822 AGATGAAGGGTGGATTCCTTCTGAATATTGTAGTCTGAAAGTGTGCGACCGTCTTCAAGT 634881 Query 44192 TGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATC 44251 ||||| |||||||||||||||||||| || || | || | |||||||| || ||| Sbjct 634882 TGCTTGCCGGCAAAGATCAAACGCTGTTGGTCGGGGGGGATCCCTTCCTTGTCTTGGATC 634941 Query 44252 TTCTGCTT---CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 || |||| || ||| | ||||| || | || |||||||||| ||||| ||||| Sbjct 634942 TT-GGCTTTGACATTGT--CAATGGTATCAGAAGACTCCACCTCCAGGGTAATGGTCTTG 634998 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || | ||||| || ||||||||||| Sbjct 634999 CCAGTCAAAGTCTTTACAAAGATTTGCAT 635027 Score = 111 bits (122), Expect = 1e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 44132 AGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGC 44191 || || || ||| ||| || || || ||||| || | ||| ||| | || || ||| Sbjct 634529 AGATGGAGGGTGGACTCTTTCTGAATATTGTAGTCTGAGAGGGTGCGACCATCTTCGAGC 634588 Query 44192 TGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATC 44251 ||||||||||| |||||||| ||||| ||||| | ||| | |||||||| ||| || Sbjct 634589 TGCTTCCCGGCGAAGATCAAGCGCTGTTGATCGGGAGGGATGCCTTCCTTGTCCTGGATT 634648 Query 44252 TTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCC 44311 || ||| | | | ||||| |||| || || ||||| | ||||| |||||||| Sbjct 634649 TTGGCCTTGACGTTATCAATGGTATCGGACGACTCGACCTCGAGAGTAATGGTCTTTCCG 634708 Query 44312 GTGAGGGTCTTCACGAAGATTTGCAT 44337 || | ||||| || ||||||||||| Sbjct 634709 GTCAAAGTCTTGACAAAGATTTGCAT 634734 >seq2 Length=1435055 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 ||| || || ||||||||||| | | | || | || || |||||||| || ||||| Sbjct 394630 CTCTTTCTGTATGTTGTAATCTGACAATGTTCGGCCATCCTCAAGCTGCTTGCCTGCAAA 394689 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 ||||| ||| || ||||| | ||| | ||| ||||| ||| ||||| ||| | | Sbjct 394690 GATCAGACGTTGTTGATCAGGAGGAATACCCTCCTTATCCTGAATCTTTGCCTTGACATT 394749 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | |||||||| | |||||| || || | || |||||||| ||||| | ||||| || Sbjct 394750 ATCGATGGTGTCAGAGGATTCGACTTCGAGGGTGATCGTCTTGCCCGTCAAAGTCTTGAC 394809 Query 44326 GAAGATTTGCAT 44337 ||| || ||||| Sbjct 394810 GAAAATCTGCAT 394821 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359982713304984