Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq2 156 1e-32 seq1 149 2e-30 seq20 87.8 4e-12 >seq2 Length=1435055 Score = 156 bits (172), Expect = 1e-32 Identities = 166/219 (76%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || ||||| || || || || ||||| |||||||| || ||||| Sbjct 395046 CAGATTTTCGTCAAGACTCTTACTGGCAAGACTATCACTCTCGAGGTCGAGTCATCAGAT 394987 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || ||||| ||||||||||| || || || |||||||| ||||| ||| Sbjct 394986 ACCATTGACAATGTCAAGGCGAAGATTCAGGATAAGGAGGGCATCCCTCCTGACCAACAA 394927 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||||||||| || ||||| ||||| ||||| | ||||| |||| || || | Sbjct 394926 CGTCTTATCTTCGCTGGCAAACAACTCGAGGATGGCCGCACTCTCTCCGACTACAATATT 394867 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 || || ||||| ||||| || ||||| | | |||||| Sbjct 394866 CAGAAGGAATCTACACTTCACCTTGTCCTTCGGCTCAGA 394828 Score = 149 bits (164), Expect = 2e-30 Identities = 156/205 (76%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || ||| | || || || |||||||||||||| || ||| ||| ||| Sbjct 394818 CAGATTTTCGTCAAGACTTTGACGGGCAAGACGATCACCCTCGAAGTCGAATCCTCTGAC 394759 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| |||||||||||| || || || || ||||| || || ||| Sbjct 394758 ACCATCGATAATGTCAAGGCAAAGATTCAGGATAAGGAGGGTATTCCTCCTGATCAACAA 394699 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || || || ||||| || ||||| | || | | ||||| ||| | Sbjct 394698 CGTCTGATCTTTGCAGGCAAGCAGCTTGAGGATGGCCGAACATTGTCAGATTACAACATA 394639 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || ||||| || || |||||||||| Sbjct 394638 CAGAAAGAGTCGACTCTGCATCTTG 394614 Score = 93.3 bits (102), Expect = 1e-13 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 178026 ATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACT 178085 |||||||| ||||| || || || ||||| ||||| |||||||| || ||||| || || Sbjct 395172 ATCCCTCCCGACCAACAGCGTCTCATCTTTGCCGGCAAACAGCTTGAGGATGGTAGAACA 395113 Query 178086 CTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 || |||| ||||| |||| || ||||| || ||||||||||| Sbjct 395112 CTCTCCGACTATAATATCCAGAAGGAATCGACCCTGCATCTTGT 395069 >seq1 Length=1986796 Score = 149 bits (164), Expect = 2e-30 Identities = 159/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||| || || || || || || || || ||||| |||||||| ||| || ||| Sbjct 634452 CAAATTTTTGTCAAGACGCTGACGGGCAAGACCATCACGCTCGAGGTTGAATCTTCCGAC 634393 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || ||||| || || |||||||| || || || ||||| ||||| ||| Sbjct 634392 ACGATTGATAATGTCAAGGCGAAAATCCAGGACAAGGAGGGCATTCCTCCTGACCAACAA 634333 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| |||||||||||||| ||||| || | ||||| | ||||| ||| || Sbjct 634332 CGCTTGATCTTTGCCGGAAAACAGCTTGAAGACGGTCGCACTCTGTCTGATTACAACATC 634273 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133 || ||||| || || |||||||| ||| || Sbjct 634272 CAGAAAGAGTCGACGCTGCATCTCGTTCTG 634243 Score = 127 bits (140), Expect = 5e-24 Identities = 141/188 (75%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||||||||| || || || || || ||||| || | || ||||| || ||| Sbjct 634224 CAGATTTTCGTGAAGACGCTGACCGGCAAGACGATTACGTTGGAAGTGGAGTCATCGGAC 634165 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || ||||| || ||||||||||||||| ||||| || || || |||||||| Sbjct 634164 ACGATTGACAACGTGAAGGCAAAGATTCAGGACAAGGAAGGGATTCCGCCTGACCAGCAG 634105 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || || || ||||| ||||| || ||||| ||| | || || ||| || Sbjct 634104 CGCCTGATCTTTGCGGGCAAGCAGCTTGAAGACGGGAGGACGCTTTCTGACTACAACATC 634045 Query 178104 CAAAAAGA 178111 || || || Sbjct 634044 CAGAAGGA 634037 Score = 127 bits (140), Expect = 5e-24 Identities = 151/205 (74%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || ||| | || ||||| || || || |||||||| || || || Sbjct 634731 CAAATCTTTGTCAAGACTTTGACCGGAAAGACCATTACTCTCGAGGTCGAGTCGTCCGAT 634672 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || |||||||| || || |||||||| ||||| |||||||| || || || Sbjct 634671 ACCATTGATAACGTCAAGGCCAAAATCCAGGACAAGGAAGGCATCCCTCCCGATCAACAG 634612 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||||||||| || |||||||||||||| | || || | || || || | Sbjct 634611 CGCTTGATCTTCGCCGGGAAGCAGCTCGAAGATGGTCGCACCCTCTCAGACTACAATATT 634552 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || ||||| || || || ||||||| Sbjct 634551 CAGAAAGAGTCCACCCTCCATCTTG 634527 Score = 98.7 bits (108), Expect = 2e-15 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 178026 ATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACT 178085 || ||||| |||||||| || || |||||||| || ||||||||||||||||| | || Sbjct 635150 ATACCTCCTGACCAGCAGCGTCTCATCTTCGCTGGTAAACAGCTCGAAGATGGCCGCACG 635091 Query 178086 CTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 ||| |||| |||||| |||| || ||||| || |||| ||||| Sbjct 635090 CTTTCCGACTATAACATCCAGAAGGAATCCACCTTGCACCTTGT 635047 >seq20 Length=1067518 Score = 87.8 bits (96), Expect = 4e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || ||||| || || ||||||||||||||||| || || ||| Sbjct 158514 CAGATTTTCGTCAAGACCCTCACGGGTAAGACGATCACCCTCGAGGTCGAGTCGTCTGAC 158455 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGG 178024 |||||||| || ||||| || ||||||||||| ||||| Sbjct 158454 ACCATCGACAATGTCAAGGCCAAAATTCAGGACAAGGAAGG 158414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203704179243888