Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq1 167 2e-36 seq2 107 2e-18 seq7 96.9 3e-15 >seq1 Length=1986796 Score = 167 bits (184), Expect = 2e-36 Identities = 164/209 (78%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 41655 CCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGA 41714 ||||||||| ||||||||||||||| ||||| ||||| || || || | | |||| || | Sbjct 634020 CCAGATGCAACGTGCTCTCCTTCTGGATGTTGTAGTCAGAAAGCGTCCTCCCGTCTTCAA 634079 Query 41715 GCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGA 41774 |||||||||| || || ||||||||||| ||||| | |||| | ||||||||| ||| Sbjct 634080 GCTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCAGGCGGAATCCCTTCCTTGTCC-TGA 634138 Query 41775 TTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 | ||||| | ||| | | | ||||| |||||||| |||| ||| ||||| || Sbjct 634139 ATCTTTGCCTTCACGTTGTCAATCGTGTCCGATGACTCCACTTCCAACGTAATCGTCTTG 634198 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || ||||||||||| |||||||||||||| Sbjct 634199 CCGGTCAGCGTCTTCACGAAAATCTGCAT 634227 Score = 138 bits (152), Expect = 1e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| ||||| | || ||||||||||| ||| ||||| ||||| || || || Sbjct 634229 CCCCCGCGCAGACGCAGAACGAGATGCAGCGTCGACTCTTTCTGGATGTTGTAATCAGAC 634288 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| |||| || ||||| || ||||| || |||| ||| |||||||| | ||| Sbjct 634289 AGAGTGCGACCGTCTTCAAGCTGTTTTCCGGCAAAGATCAAGCGTTGTTGGTCAGGAGGA 634348 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCA-ACGACGACACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| |||||| ||| | | | | | |||||| || || || Sbjct 634349 ATGCCCTCCTTGTCCTGGATTTTCGCCTTGACATTATCA-ATCGTGTCGGAAGATTCAAC 634407 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| | ||| || || || |||||||||||||| || ||||| ||||| Sbjct 634408 CTCGAGCGTGATGGTCTTGCCCGTCAGCGTCTTGACAAAAATTTGCAT 634455 Score = 122 bits (134), Expect = 8e-23 Identities = 161/220 (73%), Gaps = 10/220 (5%) Strand=Plus/Plus Query 41647 ACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTC 41706 ||||| || ||||| || ||| ||| |||||||| || ||||| ||||||||||| | Sbjct 634521 ACGTACCA--AGATGGAGGGTGGACTCTTTCTGAATATTGTAGTCTGAGAGGGTGCGACC 634578 Query 41707 GTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTT 41766 || ||||||||||| |||||||| |||| ||||||||| || | || | || ||||| Sbjct 634579 ATCTTCGAGCTGCTTCCCGGCGAAGATCAAGCGCTGTTGATCGGGAGGGATGCCTTCCTT 634638 Query 41767 GTCCATGATTTTTTGCTTCAACGACGACA-CA---GTGTCGCTCGACTCCACCTCCACCG 41822 |||| |||||| ||| |||| | || || ||| |||||| ||||| | | Sbjct 634639 GTCCTGGATTTTGGCCTT----GACGTTATCAATGGTATCGGACGACTCGACCTCGAGAG 634694 Query 41823 TTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | || || || || |||| ||||| || || || ||||| Sbjct 634695 TAATGGTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCAT 634734 Score = 107 bits (118), Expect = 2e-18 Identities = 156/217 (72%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 41647 ACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTC 41706 ||||| || ||||| || ||| ||||||||||| || ||||| || || ||||| | Sbjct 634814 ACGTACCA--AGATGAAGGGTGGATTCCTTCTGAATATTGTAGTCTGAAAGTGTGCGACC 634871 Query 41707 GTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTT 41766 ||| || || ||||||||||| || |||| ||||||||||| | ||| | | ||||| Sbjct 634872 GTCTTCAAGTTGCTTGCCGGCAAAGATCAAACGCTGTTGGTCGGGGGGGATCCCTTCCTT 634931 Query 41767 GTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTA 41825 || | || | || |||| || | | | || || ||||||||||||| || | Sbjct 634932 GT-CTTGGATCTTGGCTTTGACATTGTCAATGGTATCAGAAGACTCCACCTCCAGGGTAA 634990 Query 41826 TCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | || || || |||| |||||||| || || ||||| Sbjct 634991 TGGTCTTGCCAGTCAAAGTCTTTACAAAGATTTGCAT 635027 Score = 91.5 bits (100), Expect = 1e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| ||||| | ||| || |||| ||| |||||||| |||||||||||||| Sbjct 635029 CCACCGCGGAGACGGAGCACAAGGTGCAAGGTGGATTCCTTCTGGATGTTATAGTCGGAA 635088 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC 41748 || ||||| | || |||||||| || || ||||| || || ||||| ||||| Sbjct 635089 AGCGTGCGGCCATCTTCGAGCTGTTTACCAGCGAAGATGAGACGCTGCTGGTC 635141 >seq2 Length=1435055 Score = 107 bits (118), Expect = 2e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 41672 TCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 41731 ||||||||||| || ||||||||||| ||||| | || ||||| || ||||| ||||| Sbjct 394859 TCCTTCTGAATATTGTAGTCGGAGAGAGTGCGGCCATCCTCGAGTTGTTTGCCAGCGAAG 394918 Query 41732 ATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGAC 41791 || || || |||||||| | || | || |||||| ||| ||| | || || | || Sbjct 394919 ATAAGACGTTGTTGGTCAGGAGGGATGCCCTCCTTATCC-TGAATCTTCGCCTTGACATT 394977 Query 41792 GAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850 | | | || || ||||| ||||| | || || || || || || || ||||| || Sbjct 394978 GTCAATGGTATCTGATGACTCGACCTCGAGAGTGATAGTCTTGCCAGTAAGAGTCTTGAC 395037 Query 41851 GAAAATCTGCATG 41863 ||||||||||||| Sbjct 395038 GAAAATCTGCATG 395050 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/212 (71%), Gaps = 3/212 (1%) Strand=Plus/Plus Query 41653 CACCA-GATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGT 41711 ||||| ||||||| || ||| ||||| ||||| || || || | || || | || | Sbjct 394611 CACCAAGATGCAGAGTCGACTCTTTCTGTATGTTGTAATCTGACAATGTTCGGCCATCCT 394670 Query 41712 CGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCA 41771 | ||||||||||| || || ||||| || ||||| || | |||| | |||||| ||| Sbjct 394671 CAAGCTGCTTGCCTGCAAAGATCAGACGTTGTTGATCAGGAGGAATACCCTCCTTATCC- 394729 Query 41772 TGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTT 41830 ||| | ||||| | || | | ||||| || || || || | || ||||| Sbjct 394730 TGAATCTTTGCCTTGACATTATCGATGGTGTCAGAGGATTCGACTTCGAGGGTGATCGTC 394789 Query 41831 TTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || ||||||| ||||| |||||||||||||| Sbjct 394790 TTGCCCGTCAAAGTCTTGACGAAAATCTGCAT 394821 Score = 84.2 bits (92), Expect = 2e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 |||||| || || || | || |||||||| || |||||||| || ||||||||||| Sbjct 395050 GCCGCCACGCAGGCGAAGGACAAGATGCAGGGTCGATTCCTTCTGGATATTATAGTCGGA 395109 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC 41748 ||| || | | || || ||||| |||||||| || || || ||||||||||| Sbjct 395110 GAGTGTTCTACCATCCTCAAGCTGTTTGCCGGCAAAGATGAGACGCTGTTGGTC 395163 >seq7 Length=1106505 Score = 96.9 bits (106), Expect = 3e-15 Identities = 89/113 (79%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||||| || || || ||||||||||||||| ||||| Sbjct 360712 CCACCACGGAGACGAAGCACCAGGTGAAGGGTAGACTCCTTCTGAATGTTGTAGTCACTA 360771 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC 41748 ||||| || | || || ||||||||||||||||| ||||||||||| ||||| Sbjct 360772 AGGGTACGGCCATCCTCAAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTC 360824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462293875542400