Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20caries_20[genbank_20GCA_5F001645005.1_202016-05-16] 2,888 sequences; 29,540,861 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq902 87.8 1e-12 >seq902 Length=42623 Score = 87.8 bits (96), Expect = 1e-12 Identities = 113/151 (75%), Gaps = 4/151 (3%) Strand=Plus/Plus Query 33571 CCAGAGATGGGCGACAAGTTTGCATCGTT-CACGGCCCAGAAGGGCACGTGCGGCATGAT 33629 || ||| | ||||||||||| | || ||||| | ||||||| |||||| |||| Sbjct 33805 CCCGAGCTCGGCGACAAGTTCTCGTCCCGACACGGTC-AGAAGGGTGTGTGCGGACTGAT 33863 Query 33630 -GTACGACCAGTGGGACATGCCGTTCACGGCCGACGGCGTGGTCCCGGACCTAGTCATCA 33688 || | | || ||||||||||||||||| | | || ||| |||||| | |||| | Sbjct 33864 CGTGCCGC-AGGCGGACATGCCGTTCACGGACAAGGGGGTGAATCCGGACATCATCATGA 33922 Query 33689 ACCCGCATGCGTTCCCCTCGCGCATGACGGT 33719 ||||||||| ||| |||||||| |||||||| Sbjct 33923 ACCCGCATGGGTTTCCCTCGCGGATGACGGT 33953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356221061467864