Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20caries_20[genbank_20GCA_5F001645005.1_202016-05-16] 2,888 sequences; 29,540,861 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq2399 248 2e-60 >seq2399 Length=11591 Score = 248 bits (274), Expect = 2e-60 Identities = 511/752 (68%), Gaps = 6/752 (1%) Strand=Plus/Plus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 ||||| |||||| |||| || | | |||||| ||||| | ||||| |||||||| || Sbjct 3349 TTCACCCACGCCTCGCCCACCCTCTTCAATGCCGGAACACCCAATCCCCAGATGTCATCC 3408 Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666 ||||| || | | |||||||| || |||||||| || |||| ||||| || |||| | Sbjct 3409 TGCTTCCTGGTCACGATGAAGGATGACTCCATCGACGGCATCTACGACACCCTCAAGACT 3468 Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTG-C 363725 || || | || ||||| || || || || || | || ||| | || | | Sbjct 3469 TGCGCCATGATCAGCAAGACGGCCGGTGGCATCGGGCTCAACATTCACTGCATCCGAGGC 3528 Query 363726 ACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCG 363785 || | | ||||||| || || || ||| || || | |||||||||||||| Sbjct 3529 ACCGG-CTCTTACATTGCTGGAACCAACGGCGTCTCCAACGGCATTGTTCCCATGCTTCG 3587 Query 363786 TGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTT 363845 || || |||| || || | ||||||||||||||||| ||||| ||||| || Sbjct 3588 AGTCTTCAACAACACCGCTCGCTACGTCGACCAGGGTGGCAACAAGCGACCGGGGGCTTT 3647 Query 363846 TGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAA 363905 ||| || || | |||||| || | || | || ||||| || || ||| |||| || Sbjct 3648 TGCCATCTACATTGAGCCTTGGCACTCGGACGTCTTCGAGTTCCTCGACCTCAGGAAGAA 3707 Query 363906 CACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCA 363965 | || || ||||| | || || ||||| || ||||| || |||||| || | ||| Sbjct 3708 CCACGGCAAGGAGGAGGTTCGCGCCCGTGAGCTCTTCTACGCCCTTTGGATTCCCGACTT 3767 Query 363966 TTTTATGAAGCGCGTGGAGGCAGGTAAGA-ATTGGTCACTCTTTTGCCCACACGAATGTC 364024 || |||||||| || || ||| || | ||||| ||| | ||||| || || | Sbjct 3768 GTTCATGAAGCGAGTCGA-ACAGAACGGAGAGTGGTCGCTCATGTGCCCCGCTGAGTGCC 3826 Query 364025 CAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGG 364084 | |||||| |||| || | ||||| || | | || || ||||| ||||| || | Sbjct 3827 CCGGTCTTGCCGACGTCTATGGTGAGGAATTCGAGGCCCTCTACGAGAAGTACGAGCGCG 3886 Query 364085 AGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGC 364144 |||| ||||| || | || |||||||| |||| ||| | |||| | | Sbjct 3887 AGGGTCGTGCTCGCCGCACGGTCAAGGCTCAGAAGCTCTGGTACGCCGTTCTGGAGGCCC 3946 Query 364145 AGATTGAGACAGGAACACCCTAT-ATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAAC 364203 ||| ||||| || | ||||| | ||| | ||||| || | |||||||||||| ||| Sbjct 3947 AGACGGAGACTGGCA-ACCCTTTCATGCTTTACAAGGACGCTGCCAACCGCAAGTCGAAC 4005 Query 364204 CAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACC 364263 ||| || |||| || || || || | ||||| || || ||||| || || |||| | Sbjct 4006 CAGAAGAACCTCGGCACCATCAAGAACTCTAACCTTTGCACGGAGATCATAGAGTACAGC 4065 Query 364264 GCTCCCGACGAGACTGCCGTATGTAACCTTGC 364295 ||||| |||||| || || || |||||||| Sbjct 4066 GCTCCGGACGAGGTCGCTGTCTGCAACCTTGC 4097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303305372658416