Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20caries_20[genbank_20GCA_5F001645005.1_202016-05-16] 2,888 sequences; 29,540,861 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq2399 217 2e-51 seq2181 132 6e-26 >seq2399 Length=11591 Score = 217 bits (240), Expect = 2e-51 Identities = 1119/1758 (64%), Gaps = 59/1758 (3%) Strand=Plus/Minus Query 113597 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGAC 113656 |||||||||||| |||||||||| | ||||| ||||||| |||| | ||||| || Sbjct 4991 CGGAGGTAGTACGTCCCCGTCTTCAACCCCTTCTTCCAGCCATAGAAGTGCATGCTGGT- 4933 Query 113657 AACTTGGAGAGTGTTGGACT-TTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAA 113715 || |||| | | | | | || || || ||||| ||||||||| || |||||| Sbjct 4932 AAGTTGGCCAAAGCTCGGCGCTTGCAGATGGATGTTCAGACTTTGGGACTGGCAGATGAA 4873 Query 113716 -GCGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTC 113774 ||| || || ||||| ||||| ||||| | ||||| | ||| ||||| || || Sbjct 4872 AGCGCCC-CGGTCCGCGGCCATGTCAATGATGACCTTCTGCGAGATCTCCCAGACCGTCT 4814 Query 113775 TGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACC---CG 113831 |||| || ||| || || ||||| | | ||| || || ||||| || || Sbjct 4813 TGTACAGCGCCTTGATCCGGTCCGGGATCCCGGGCACATTCTGAATCGAGCCGCCATGCG 4754 Query 113832 CCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCA 113891 | ||| | | | |||||| | || ||| || || || ||| || | Sbjct 4753 CTATGATCCGG---TTCTTCATCTGCTCGTTCCACAGCCCTTGCTCGACGAGCTCGCGGA 4697 Query 113892 CGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGG 113951 || | ||||| || ||||| || || || || | || | ||| Sbjct 4696 GCAGCCACGGGTTGACGACTTGGAACTCGCCAGCCAGCACACGGCGGGTGTACAGGTTGC 4637 Query 113952 TCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCA 114011 ||||||| |||||||||||||| ||| |||| ||| || || ||||| || |||| Sbjct 4636 TCGTGTAAGGCTCAAAGCACTCGTTGAAGCCCAGGATCTGACTCGTCGAGGCCGTCGGCA 4577 Query 114012 TGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGT 114071 | ||||| | | || ||| |||||||| | |||| ||||| | Sbjct 4576 TAGGTGCGAGCAACAGCGAGTTCCGGAGACCGTGCGAGGCAATGTTGCGCTTGATCTCAG 4517 Query 114072 CCCAGTCGTAGTTGA--GCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTG 114129 ||||||| | || ||| | | | | |||||| || ||||||| || | Sbjct 4516 CCCAGTCCCAAA-GACCGCTGGGGGTAACGCA-CCACATGTCGTACTGGAGCTCGCCCTT 4459 Query 114130 GGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCC---GCCAATTCGGA 114186 | ||| || | ||||| |||||||||| || || | | |||| || | ||| | Sbjct 4458 GCTGGCCGGGCAGCCCTCGTATGTCTCGTA--GGTCC-CGAGCTCCTTGGCAAGCTCGCA 4402 Query 114187 -GCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGG 114245 | |||| || || || ||||| || || ||||| || || || || | ||||| Sbjct 4401 CGATCGC-TCAAGAGCGGCGTGGTAGATGGTCTCGAAGATCTGAATGTTGAGCTTCTTGG 4343 Query 114246 CCTCGTCGGAAT--CAAACGCG-AGTCGGCACAAA-ATAAATACATCCGCGAGACCTTGG 114301 ||||| ||| | |||| ||| || | || | || ||| | || |||||||| | | Sbjct 4342 CCTCG--GGACTGTCAAAGGCGTAGCC--CATGATCATGAATGCGTCTGCGAGACCGTTG 4287 Query 114302 ACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTC---CACGGGA 114358 || |||| ||| || ||||| || | ||| || ||||| || ||| ||| || Sbjct 4286 ACTCCGATGCCGATGGGGCGGTGGCGCATGTTCGACTTCTTGGC---CTCGGGCACAGGG 4230 Query 114359 TAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGA 114418 || | ||| ||||| | | | || || || ||| ||||| |||| || ||| Sbjct 4229 TAGTAGTTCACGTCGATGATCTTGTTGAGGTTGCCACAGACGACCTTGGTGACCTCGTGA 4170 Query 114419 AGCTTTTCGTAATCAAAACT--------------GCGAGTCTCTTCATTGACATACTTAG 114464 ||||| | | | ||| | | ||||||| | || || || | | Sbjct 4169 AGCTTCTTGAAGTCATATGTCCTCGTGTTGGTTTGCGAGTCG--TAATGGATGTAGGTCG 4112 Query 114465 GAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAA 114524 | || || || || || || || |||| | ||| ||| | | |||||||||| | Sbjct 4111 GCAGAGCCATACTGGCAAGGTTGCAGACAGCGACCTCGTCCGGAGCGCTGTACTCTATGA 4052 Query 114525 TTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGT 114584 | ||||| || | || || |||| |||||||| | |||||| || || ||||| || Sbjct 4051 TCTCCGTGCAAAGGTTAGAGTTCTTGATGGTGCCGAGGTTCTTCTGGTTCGACTTGCGGT 3992 Query 114585 TACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAG 114644 | || ||||||||||||||| | || | || |||||||| |||| || |||| | Sbjct 3991 TGGCAGCGTCCTTGTAAAGCATGAAAGGGTTGCCAGTCTCCGTCTGGGCCTCCAGAACGG 3932 Query 114645 CCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTT 114703 | | ||||| | || | | || | || ||| | || || ||||| ||||||||| Sbjct 3931 CGTACCAGAGCTTCTGAGCCTTG-ACCGTGCGGCGAGCACGACCCTCGCGCTCGTACTTC 3873 Query 114704 GTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGG 114763 ||||||||| || || || ||||| | | || | || || || || | | ||| Sbjct 3872 TCGTAGAGGGCCTCGAATTCCTCACCATAGACGTCGGCAAGACCGGGGCACTCAGCGGGG 3813 Query 114764 CAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAG 114823 || | ||| ||||| | || || || || ||||||||||| | ||| || ||||| Sbjct 3812 CACATGAGCGACCACTCTCCGTTCTGTTCGACTCGCTTCATGAACAAGTCGGGAATCCAA 3753 Query 114824 AGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCC 114883 || || ||||||| || || |||| | || || | || || || | | || Sbjct 3752 AGGGCGTAGAAGAGCTCACGGGCGCGAACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCG 3693 Query 114884 AAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG- 114942 | || || | || |||| |||||| || || | ||| | || | | |||| || Sbjct 3692 AGGAACTCGAAGACGTCCGAGTGCCAAGGCTCAATGTAGATGGCAAAAGCCCCCGGTCGC 3633 Query 114943 --ACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATG 115000 ||| |||||| || || | || ||| || || || |||||||| |||| Sbjct 3632 TTGTTGCCACCCTGGTCGACGTAGCGAGCGGTGTTGTTGAAGACTCGAAGCATGGGAACA 3573 Query 115001 ATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCATGG 115060 || || | || ||| || || || ||| ||| || ||| || || Sbjct 3572 ATGCCGTTGGAGACGCCGTTGGTTCCAGCAATGTAAGAGCCGGTGCCTCGGATGCAGTGA 3513 Query 115061 ATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCG 115120 |||| | || || || || ||| ||| ||| ||||| | |||| || || Sbjct 3512 ATGTTGAGCCCGATGCCACCGGCCGTCTTGCTGATCATGGCGCAAGTCTTGAGGGTGTCG 3453 Query 115121 TAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGC 115180 ||||| |||||||| |||||| |||| | | || ||||||||| ||||| || || Sbjct 3452 TAGATGCCGTCGATGGAGTCATCCTTCATCGTGACCAGGAAGCAGGATGACATCTGGGGA 3393 Query 115181 CTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT-TGGGACAT 115239 | ||||| || || ||||||||||| || | |||||| |||| ||| | | ||||| Sbjct 3392 TTGGGTGTTCCGGCATTGAAGAGGGTGGGCGAGGCGTGGGTGAA-GTACTTCTCCGACAT 3334 Query 115240 CTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCG 115299 | ||| || || | | | | |||||| ||||||||| |||| | ||| || Sbjct 3333 GAGGTTGTAAGTGTCGATGGCCTGGTCAATGTCCCGCCCGTGAATGCCGACGGCGACTCG 3274 Query 115300 CATAAACATGTATTGGGG 115317 ||| | ||| | ||| || Sbjct 3273 CATGAGCATATGTTGCGG 3256 >seq2181 Length=22295 Score = 132 bits (146), Expect = 6e-26 Identities = 190/261 (73%), Gaps = 10/261 (4%) Strand=Plus/Plus Query 126033 TGAAGAGTTC-CACGGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTC 126091 |||||||| |||| |||| || ||| ||||||||||| ||| |||||| || || Sbjct 13418 TGAAGAGTAGGCACG-CAAAGTCGGTGTGCAGACCCTCGTCTCGGCTGATGAGCTCGTTG 13476 Query 126092 GAGAAGCACAGTCCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAA 126151 ||||| || || ||||||||||| |||||||| | |||||| || | ||| || Sbjct 13477 GAGAACGTGAGGCCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGAC 13536 Query 126152 CCCGAGAAGAAGATTCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGC 126211 || ||||||||||| |||||||| ||||| || | | ||||||||||||| | Sbjct 13537 CCAGAGAAGAAGATGCCCTCCACGGCGGCGAAGGCGATCAATCGCTCAGCAAAGG---TC 13593 Query 126212 GACTTTGTGTC---AAACCACTTCATCGCCCACTGCGCCTTTTTCTCGA-TACACGGGAC 126267 || | ||||| | |||| ||| ||||||| ||||||| || || ||| |||| Sbjct 13594 GATTCGGTGTCGTTGATCCACCGCATGGCCCACTCGGCCTTTTGCTTGACGACA-GGGAT 13652 Query 126268 GGTCTGGATCGCTTCAAAGAG 126288 ||||| || || |||||||| Sbjct 13653 GGTCTCCATGGCATCAAAGAG 13673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597332035535040