Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20caries_20[genbank_20GCA_5F001645005.1_202016-05-16] 2,888 sequences; 29,540,861 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq2399 311 9e-80 >seq2399 Length=11591 Score = 311 bits (344), Expect = 9e-80 Identities = 1119/1716 (65%), Gaps = 42/1716 (2%) Strand=Plus/Plus Query 93724 TACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGGGTTTCC 93783 ||||| | |||||| ||||| ||| || || || || || | |||| ||| || Sbjct 3190 TACTTCGGCTTCAAGACTCTCGAGCGCTCTTATCTGCTGCGCATCAACGGCAAGGTCGCC 3249 Query 93784 GAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGACATGCCG 93843 ||| | ||||| || |||| ||||| |||||| |||| |||||||| | ||||| Sbjct 3250 GAGAGGCCGCAACATATGCTCATGCGAGTCGCCGTCGGCATTCACGGGCGGGACATTGAC 3309 Query 93844 AATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCCACCCCGACC 93903 | | | ||| || |||| ||| ||| | ||| ||| | || ||| Sbjct 3310 CAGGCCATCGACACTTACAACCTCATGTCGGAGAAGTACTTCACCCACGCCTCGCCCACC 3369 Query 93904 CTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACGAACAAG 93963 || ||||| || || || || || |||||||| || || |||||| | |||| ||| Sbjct 3370 CTCTTCAATGCCGGAACACCCAATCCCCAGATGTCATCCTGCTTCCTGGTCACGATGAAG 3429 Query 93964 GCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATC-TCAA-AAT 94021 | ||||||||| ||| || | ||||| ||||||| ||| |||| |||| ||| || Sbjct 3430 GATGACTCCATCGACGGCATCTACGACACCCTCAAG-ACT-TGCG-CCATGATCAGCAAG 3486 Query 94022 ACG-CGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGC 94080 ||| | || || |||||| ||| | ||| | | || | || || || ||||| Sbjct 3487 ACGGCCGGTGGCATCGGGCTCAACATTCACTGCATCCGAGGCACCGGCTCTTACATTGCT 3546 Query 94081 GGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCG 94140 || ||||| ||| |||||||||| | || || ||||| || |||||||||||| | || Sbjct 3547 GGAACCAACGGCGTCTCCAACGGCATTGTTCCCATGCTTCGAGTCTTCAACAACACCGCT 3606 Query 94141 CGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCC 94200 |||||||| ||||||||||| | | | ||| |||| || |||| | ||||| Sbjct 3607 CGCTACGTCGACCAGGGTGGCAACAAGCGACCGGGGGCTTTTGCCATCTACATTGAGCCT 3666 Query 94201 TGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAG 94260 |||||| ||||||| | ||| ||||||| | |||||||||||||| || || Sbjct 3667 TGGCACTCGGACGTCTTCGAGTTCCTCGACCTCAGGAAGAACCACGGCAAGGAGGAGGTT 3726 Query 94261 AGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAG 94320 | ||| | || ||||||||||| || ||| | || ||| | || ||||| || ||||| Sbjct 3727 CGCGCCCGTGAGCTCTTCTACGCCCTTTGGATTCCCGACTTGTTCATGAAGCGAGTCGAA 3786 Query 94321 AAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTTTGT 94380 | ||| | ||| || | || ||| ||| || ||||| || ||||||| | | Sbjct 3787 CAGAACGGAGAGTGGTCGCTCATGTGCCCCGCTGAGTGCCCCGGTCTTGCCGACGTCTAT 3846 Query 94381 GGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGC-AGGGCAAGGC---CAGGAA 94436 || | || || | | | || | |||| | ||| |||| || | | | Sbjct 3847 GGTGAGGAATTCGAGGCCCTCTACGAGAAGTACG-AGCGCGAGGGTCGTGCTCGCCGCAC 3905 Query 94437 GGTTATGGATGCTAGGAAGCTGTGGGA-TCAGATCGTGGACGTACAGGTGGAGACGGGTA 94495 ||| | | ||| |||||| ||| | | | || |||| | ||| |||||| || | Sbjct 3906 GGTCA---AGGCTCAGAAGCTCTGGTACGCCGTTC-TGGAGGCCCAGACGGAGACTGGCA 3961 Query 94496 CGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGG 94555 || | ||| | | ||||||| ||| |||| |||||| |||||| || ||||||| Sbjct 3962 ACCCTTTCATGCTTTACAAGGACGCTGCCAACCGCAAGTCGAACCAGAAGAACCTCGGCA 4021 Query 94556 TGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTG 94615 ||||||| ||| || || ||||| ||||| | ||||| | ||||||||||| | | Sbjct 4022 CCATCAAGAACTCTAACCTTTGCACGGAGATCATAGAGTACAGCGCTCCGGACGAGGTCG 4081 Query 94616 CTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCT---ACACGT 94672 |||| || ||||| | | || ||| | || | | | | | | || | || Sbjct 4082 CTGTCTGCAACCTTGCCAGTATGGCTCTGCCGACCTACATCCATTACGACTCGCAAACCA 4141 Query 94673 CTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCT-TG--A 94729 || | | || | || ||||| | || | |||| | |||| || | Sbjct 4142 ACACGAGGACATATGACTTCAAGAAGCTTCACGAGGTCAC--CAAGG-TCGTCTGTGGCA 4198 Query 94730 ACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACC 94789 |||| |||| | | |||||| ||||| |||||| || || ||||| |||| || ||| Sbjct 4199 ACCTCAACAAGATCATCGACGTGAACTACTACCCTGTGCCCGAGGCCAAGAAGTCGAACA 4258 Query 94790 TGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGC 94849 || || || |||||||||||||| ||| | ||| |||| ||||| | |||| ||| Sbjct 4259 TGCGCCACCGCCCCATCGGCATCGGAGTCAACGGTCTCGCAGACGCATTCATGATCATG- 4317 Query 94850 GTCTGC-CCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCATT 94908 | || | ||| ||| | ||| || | | || | | || ||||| | ||| Sbjct 4318 GGCTACGCCTTTGACAGTCCCGAGGCCAAGAAGCTCAACATTCAGATCTTCGAGACCATC 4377 Query 94909 TATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACACGAA 94968 || ||| || | | | ||| | | | |||| ||| |||| | |||| Sbjct 4378 TACCACGCCGCTCTTGAGCGATCGTGCGAGCTTGCCA---AGGAGCTCGGGACCTACGAG 4434 Query 94969 TCGTTCCGCGGATCGCCCTTGGAAC-AGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAA 95027 | | || || |||| | | ||||| | |||| |||| | ||| | || | Sbjct 4435 AC-ATACGAGGGCTGCCCGGCCAGCAAGGGCGAGCTCCAGTACGACATGTGGTGCGTTAC 4493 Query 95028 GCCCTCGGGTCTGTACGACTGGG--AAGCTCTACGCGCTGATGTTATCAAACACGGTGTG 95085 ||| ||||| | ||||||| || || | |||| | || | |||||| | Sbjct 4494 CCCCAGCGGTCTTTGGGACTGGGCTGAGATC-AAGCGC-AACATTGCCTCGCACGGTCTC 4551 Query 95086 AAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAAC 95145 ||| ||||| | | || || ||||| |||||||| ||| |||||||| ||| | Sbjct 4552 CGGAACTCGCTGTTGCTCGCACCTATGCCGACGGCCTCGACGAGTCAGATCCTGGGCTTC 4611 Query 95146 AACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAA 95205 ||||||| || || || | ||| |||| |||||| | | || ||||| || || || Sbjct 4612 AACGAGTGCTTTGAGCCTTACACGAGCAACCTGTACACCCGCCGTGTGCTGGCTGGCGAG 4671 Query 95206 TTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTC--TCTGGGTGTGTGGGGTG 95263 |||| ||| ||||| | || || || || || |||| | || ||||| | Sbjct 4672 TTCCAAGTCGTCAACCCGTGGCTGCTCCGCGAGCT--CGTCGAGCAAGGGCTGTGGAACG 4729 Query 95264 ACAAGGTCAAGAACCAACTGCTACGCGC-CAACGGCTCCGTCCAGAACATCCCGCAAATA 95322 | || | ||||||| | || |||| |||||| | ||||| | || || Sbjct 4730 AGCAGATGAAGAACCGGATCATA-GCGCATGGCGGCTCGATTCAGAATGTGCCCGGGATC 4788 Query 95323 CCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGCGTGATACTC 95382 ||||| ||||||||||| |||||||| || ||||||||| ||||| || || | Sbjct 4789 CCGGACCGGATCAAGGCGCTGTACAAGACGGTCTGGGAGATCTCGCAGAAGGTCATCATT 4848 Query 95383 GACCACGCGGCCGCCCGCGGGCCCTTCATCTGCCAG 95418 ||| || || | ||| || | |||||||||||| Sbjct 4849 GACATGGCCGCGGACCGGGGCGCTTTCATCTGCCAG 4884 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494705340492480