Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20caries_20[genbank_20GCA_5F001645005.1_202016-05-16] 2,888 sequences; 29,540,861 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq2114 96.9 3e-15 seq2399 86.0 6e-12 >seq2114 Length=91084 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 || || || || ||||| ||||| || || ||| || || | || || | || Sbjct 23126 TGGAGTGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGACCGTCCTCAAGCTGC 23067 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 ||||| ||| | || | ||||| ||||||||||||||||| || || || || || ||| Sbjct 23066 TTTCCGGCGAAGATGAGACGTTGTTGGTCCGGCGGAATGCCCTCCTTGTCCTGGATCTTT 23007 Query 45258 TGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTT 45317 |||| || | |||||| ||||||||||| ||||| || | || |||||||| Sbjct 23006 GTCTTGACATTGTCAATGGTGTCTGAAGACTCGACCTCGAGGGTGATGGTCTTGCCGGTC 22947 Query 45318 AGAGTTTTTACAAAAATTTGCAT 45340 || || || || || || ||||| Sbjct 22946 AGCGTCTTGACGAAGATCTGCAT 22924 >seq2399 Length=11591 Score = 86.0 bits (94), Expect = 6e-12 Identities = 214/317 (68%), Gaps = 10/317 (3%) Strand=Plus/Plus Query 124004 CGAAACAATTTATTACGGCGCTTTGGAGGCGAGC-TGCGAACTTGCGAAAATTCACGGCG 124062 ||| || || || ||| |||| | ||| ||| | ||||| ||||| || | ||| Sbjct 4368 CGAGACCATCTACCACGCCGCTCTTGAG-CGATCGTGCGAGCTTGCCAAGGAGCTCGGGA 4426 Query 124063 CGTACGAAAGTTACGCGGGCAGCCCGGCGAGCCGAGGTATTTTGCAGTACGACATGTGGA 124122 | ||||| | |||| |||| ||||||| ||| || | ||||||||||||||| Sbjct 4427 CCTACGAGACATACGAGGGCTGCCCGGCCAGCAAGGGCGAGCTCCAGTACGACATGTGGT 4486 Query 124123 ATGCTACACCGACAAATTTGTGGGACTGGAGCGTTTTAAAACAA-CGCAT-ATCGAC--G 124178 | ||| || | | | ||||||||| || | | | ||| |||| || | | | Sbjct 4487 GCGTTACCCCCAGCGGTCTTTGGGACTGG-GC---TGAGATCAAGCGCAACATTGCCTCG 4542 Query 124179 CACGGTTTGCGTAACTCGCTGTTGGTGGCGTACATGCCGACGGCAACCACTGCTCAAATT 124238 |||||| | || |||||||||||| | || ||||||||||| | || ||| || Sbjct 4543 CACGGTCTCCGGAACTCGCTGTTGCTCGCACCTATGCCGACGGCCTCGACGAGTCAGATC 4602 Query 124239 TTAGGAAACAACGAATCCTTCGAGCCGTTCACTAACAATTTGTACGTGCGACGAGTGTTA 124298 | || |||||| | ||| ||||| | ||| | ||| ||||| || || ||| | Sbjct 4603 CTGGGCTTCAACGAGTGCTTTGAGCCTTACACGAGCAACCTGTACACCCGCCGTGTGCTG 4662 Query 124299 GCCGGCGATTTTCAAGT 124315 || ||||| || ||||| Sbjct 4663 GCTGGCGAGTTCCAAGT 4679 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451986882684480