Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20caries_20[genbank_20GCA_5F001645005.1_202016-05-16] 2,888 sequences; 29,540,861 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq2191 430 2e-115 seq2 141 1e-28 >seq2191 Length=83422 Score = 430 bits (476), Expect = 2e-115 Identities = 764/1105 (69%), Gaps = 16/1105 (1%) Strand=Plus/Plus Query 7022 ATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTC 7081 |||||||| ||||| | || ||||| ||||| ||||| |||||||| || | || || Sbjct 63254 ATGGCGGCCTGGACGGCGGCACCGTAGGCGACGGCCTCGTCGGGGTTGATGGACTTGTTG 63313 Query 7082 AGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGAT 7141 | || |||||| || | || | | | |||| ||||| || || || Sbjct 63314 GGCTCGCGACCGTTGAAGAAGTCGCGGAGGAGCTTCTGAACACGGGGGATACGCGTGGAG 63373 Query 7142 CCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTT 7201 ||||||||||| ||||| || || || | || || ||||| ||||| || || Sbjct 63374 CCACCGACCAAGACGATCTCGTTGACGGAGGCCTTGTCTATCTTGGAGTCGCGGAGCACC 63433 Query 7202 TTTTCGACAGGTTCCATACATTTACG-GAACAAGTCCATACACAGTTCCTCAAAACGTGC 7260 || ||||| || || || | | || ||| | ||| ||| || |||||||| || || Sbjct 63434 TTCTCGACGGGGTCGATGG-TGTGCGAGAAGAGGTCGCCACAGAGCTCCTCAAAGCGGGC 63492 Query 7261 ACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGT 7320 |||||||||||| || ||||| || | ||| ||| | | ||| || || || ||||| || Sbjct 63493 ACGGGTAATGGAGGTGTAGAAGTCGATGCCCTCGAAGAGCGAGTCGATCTCGATGGTGGT 63552 Query 7321 TTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAG 7380 || || | ||||| | || |||||||||||||| || ||||| | |||||| | Sbjct 63553 CTGGGCGGCGGAAGAAAGGGTACGCTTTGCGCGCTCGGCGGCGGTTCGGAGACGACGGAC 63612 Query 7381 GGCACGCG--GGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAG 7438 ||| || | | | | || || || || || | || || || ||||| | |||| Sbjct 63613 GGCGCGAGCAGATGA--GGTGATGTCCTTTTTGTTCTTGCGCTTGAACTCCTGGACGAAG 63670 Query 7439 TGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCT 7498 || | ||| | ||||| || |||||||||||||| || || || ||||| || Sbjct 63671 TGGGTGACGAGACGGTTGTCGAAGTCCTCACCACCCAAGTGGGTGTCACCGGCGGTGGCC 63730 Query 7499 TTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCC 7558 ||||| || ||||| || |||| ||| | | | ||| ||||| ||||| || || ||| Sbjct 63731 TTGACCTCGAAGATGCCCTCTTCGATGGTAAGGAGCGAGACATCGAACGTGCCTCCTCCC 63790 Query 7559 AGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATA 7618 | ||| || || || |||||| | ||| | || ||||| ||||||||||| || || Sbjct 63791 AAGTCGAAGATCAGGACGTTCTTCTCGCCCTCGCCCTTCTTGTCGAGACCGTAAGCAATG 63850 Query 7619 GCCGCCGCCGTTGGTTCATTAATAATACG-AAGACAGTTCAGGCCAGCAATAGTTGCCGC 7677 || || || || || || || || || || | ||| ||| ||||||||||| || | || Sbjct 63851 GCGGCGGCGGTGGGCTCGTTGATGATGCGCATGAC-GTTGAGGCCAGCAATCGTACCGGC 63909 Query 7678 ATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTC 7737 || || || ||||| ||||| || ||||| ||||| || ||||| || ||||| ||||| Sbjct 63910 GTCCTTGGTGGCTTGGCGTTGAGAGTCGTTGAAGTAAGCAGGGACTGTGACGACGGCGTC 63969 Query 7738 CGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGA 7797 | |||| | |||||| || | || ||| | || ||| ||| | || ||||| | Sbjct 63970 CTTGACGGTGCCACCGAGGTAGGCCTCGGCGGTCTCGCGCATCTTGATGAGGACCATGGC 64029 Query 7798 TGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGG 7857 || || || || | | || || || || || ||| || |||| || ||||| Sbjct 64030 AGAGATTTCCTCGGGGGTGAAAGTCTTGGTCTCTCCCTTAGCCTCGACTTGGATTATGGG 64089 Query 7858 TTTATCCGCAGCACCGG-GGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCT 7916 || | || || ||||||||| | | ||| | ||||| ||| || || | Sbjct 64090 CTT----GGTGCCTTGGTCGATAACCTTGAAGGGCCAGTGCTTCATGTCGGACTGCACTT 64145 Query 7917 GTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGT 7976 ||| | ||||| | |||||| || ||||| || || || |||||||| | ||||| Sbjct 64146 CGCTGTCGGCGAACTTGCGTCCGATGAGCCGCTTGGCGTCGAAGACTGTGTTGTGGGGGT 64205 Query 7977 TCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACG 8036 ||||||| || ||||||||||| ||||| ||||| || || || | || || || | Sbjct 64206 TCATGGCGGTCTGGTTCTTCGCGGCGTCACCGATGAGGCGCTC---TGTGTCGGTGAAGG 64262 Query 8037 CGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGT 8096 |||| || || || || || || || || |||||||| || |||| || || ||||||| Sbjct 64263 CGACATATGAGGGTGTTGTCCGGTTGCCCTGGTCGTTGGCGATAACCTCGACCCGGTCGT 64322 Query 8097 TTTGCCAGACGCCGACGCACGAATA 8121 ||||||||||| |||| || || || Sbjct 64323 TTTGCCAGACGGCGACACAGGAGTA 64347 >seq2 Length=121030 Score = 141 bits (156), Expect = 1e-28 Identities = 285/413 (69%), Gaps = 16/413 (4%) Strand=Plus/Plus Query 7247 TCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCA 7306 ||||| ||||| |||||||| ||||| | | ||| || | |||| | | | || || Sbjct 106423 TCCTCGAAACGGGCACGGGTGATGGAGGCCTGGAAGTCGATACCGTTGGAGAGAGAGTCG 106482 Query 7307 ATTTCAATGGTTGTTTG--TGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCG 7364 | || | ||| || || || | | || || ||||||||||||||||| ||||| | Sbjct 106483 ACCTCGACGGTGGTCTGGGTGACACTG--GACAATGTTCGCTTTGCGCGCTCGCACGCAG 106540 Query 7365 TTCGTAAACGACGAAGGGCACGCGG---GTTACCGGAAATATCTTTCTTATGTTTACGTT 7421 || | |||||| | ||||||||| || |||| || || ||| | || || | Sbjct 106541 ACCGCAGACGACGGATGGCACGCGGGTCGTCACCG---ATCTCGACCTTGTTCTTGCGCT 106597 Query 7422 TAAACTCTTCAGAGAAGT-GTCGA-AGGAGTCTCGAATCGAAATCTTCACCACCCAAGTG 7479 |||||| | ||||| ||||| | | | | | ||||| || |||||||| | || Sbjct 106598 CAAACTCCTTCTTGAAGTGGTCGAGAAGGGCGTTG--TCGAAGTCCTCACCACCGAGATG 106655 Query 7480 TGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAAC 7539 || || || ||||| || ||||| | |||| ||| || |||||| | | || || Sbjct 106656 GGTGTCACCAGCGGTTGCCTTGACGGCGAAGACACCACCGGTAATGTTGAGAAGTGAGAC 106715 Query 7540 ATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATC-GTCGTCTTTGTTCT 7598 ||| ||||| || || |||||||| |||||||| |||||| | || |||| | || Sbjct 106716 ATCGAACGTGCCTCCTCCCAGGTCGAAAATGAGAACGTTCTTCTCGGTCGAC-GACTTGG 106774 Query 7599 TATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGA 7651 ||||||||||| || || || || || || || || || || ||||| ||| Sbjct 106775 AGTCGAGACCGTAAGCAATGGCGGCGGCAGTGGGCTCGTTGATGATACGGAGA 106827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635109871705920