Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20caries_20[genbank_20GCA_5F001645005.1_202016-05-16] 2,888 sequences; 29,540,861 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq2136 86.0 8e-12 >seq2136 Length=88085 Score = 86.0 bits (94), Expect = 8e-12 Identities = 196/289 (68%), Gaps = 7/289 (2%) Strand=Plus/Minus Query 197562 CCAAGCAACTGCCTCAGCGTCCAAGATGAAAGACTTCACTCCCTCGTTGATCGATTGGGG 197621 ||| || || ||||||||||| | | || |||||||||||||||||| | || || Sbjct 81604 CCAGGCGACGGCCTCAGCGTCGAGCACAAAGCTCTTCACTCCCTCGTTGATACAGTGTGG 81545 Query 197622 AAGCCTATTGATTATGTCGGGGTACTTCTCGGTGTTATTTTCAGAGTTGCGGCTAAAAAT 197681 || | | | | |||||||||||| || | | || || |||||||| || |||| Sbjct 81544 AATCTGCTGCACAAGGTCGGGGTACTTGACGCTCATGTTCTCCGAGTTGCGACTGAAAA- 81486 Query 197682 TCTAATCTTCCCTCCCTCCATGTAGTGAATCTGAGCCCTCTCTCCGTCATACTTGTACTC 197741 | | | | || || |||||| | ||| || | || ||||| ||||||||||| Sbjct 81485 CCGA--GAGCACGCCGTCGGAGTAGTGCACCTGCGCTCGTTCGCCGTCGTACTTGTACTC 81428 Query 197742 GCAAGAAAAGACAGCT-CCTTTCAGCTTGCTC-ATCACGTCTTCGATTCCCGTGGTAGGA 197799 ||| | | || ||| | |||| | | || | ||| || ||||| || | || || Sbjct 81427 GCACGTGA--ACCGCTGGCCTTCAAATCGGTCTAGCACTTCACCGATTGCCTTCGTTGGC 81370 Query 197800 GTGGCGAGCATAGGTTTCATGGGAATTCCGGCAGCGGACTCGCAACTCT 197848 |||||||||| || || | || ||||||| | | || ||| |||| Sbjct 81369 TTGGCGAGCATTGGCTTGAGCGGTATTCCGGGCGTGAGCTTGCATCTCT 81321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676705170061440