Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20caries_20[genbank_20GCA_5F001645005.1_202016-05-16] 2,888 sequences; 29,540,861 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq2114 86.0 4e-11 >seq2114 Length=91084 Score = 86.0 bits (94), Expect = 4e-11 Identities = 108/148 (73%), Gaps = 8/148 (5%) Strand=Plus/Plus Query 480618 TCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTG 480677 || ||||| ||||| || ||||| || ||||||||||| || |||||||| || |||||| Sbjct 18723 TCCTCAAGCTGCTTGCCGGCAAAGATCAGACGTTGTTGGTCCGGAGGAATGCCCTCCTTG 18782 Query 480678 TCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGT----TTCAAGGGT 480733 || || ||||| |||||| || || || || || | | | || ||||| Sbjct 18783 TCCTGGATCTTGGTCTTGACATTGTCGATGGT----GTCTGAGGACTCGACCTCGAGGGT 18838 Query 480734 AATAGTTTTACCGGTGAGAGTCTTAACG 480761 ||| || || || || |||||||||||| Sbjct 18839 AATGGTCTTGCCAGTAAGAGTCTTAACG 18866 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268055319667424