Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20caries_20[genbank_20GCA_5F001645005.1_202016-05-16] 2,888 sequences; 29,540,861 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq1682 183 4e-40 seq2399 172 7e-37 seq2181 161 1e-33 seq935 129 7e-24 seq1079 111 2e-18 seq1 111 2e-18 seq1986 96.9 4e-14 >seq1682 Length=1376 Score = 183 bits (202), Expect = 4e-40 Identities = 282/401 (70%), Gaps = 6/401 (1%) Strand=Plus/Plus Query 18088 GTCACCACCTTTGGCGAGTCGCACGGGGCGGGCGTCGGCTGCATCATCGACGGCGTGCCG 18147 |||||||||| ||||||||| ||| | || ||||||||||||| |||||||| ||| Sbjct 306 GTCACCACCTATGGCGAGTCCCACTGCGCCTCCGTCGGCTGCATCGTCGACGGCTGCCCG 365 Query 18148 CCGTGCATGCCACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGC 18207 || ||||| | || |||| | |||| ||||| ||| | || ||||| || ||| Sbjct 366 CCCGGCATGGCCCTCTCCGACGACGACGTCCAGGTCCAGCTCAGCCGTCGCCGCCCTGGC 425 Query 18208 CAGGGCGCACTTTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACG 18267 ||| | || |||| |||||| | ||| || |||||| |||||||| ||| Sbjct 426 CAGTCCAACCTGACCACCCCGCGCGATGAGAAGGACCGCGTCCAGATCCAGTCCGGCGTC 485 Query 18268 GAGAACGGCCTCACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGG 18327 ||||| || |||| ||||| ||||| | | | | || |||| || ||||| Sbjct 486 GAGAAGGGTATCACCCTCGGTACGCCCATTGCCATGCGCGTCCAGAACCAGGATCAGCGC 545 Query 18328 CCCGTCGACTATTCCGA---CATGTGCAAGGT---GCCGCGGCCCTCACACGCCGACTAC 18381 ||| ||| || |||| || | | | | ||||| ||||| |||||||||||| Sbjct 546 CCCAACGATTACACCGACCGCACGCTCGACCTCTACCCGCGCCCCTCCCACGCCGACTAC 605 Query 18382 ACCTACATGGCCAAGTACGGCATCAAGGCGTCGTCGGGCGGAGGCCGGTCGTCTGCCCGC 18441 |||||| | | |||||||| |||||||| ||||||||||| || || ||||| Sbjct 606 ACCTACCTTGAGAAGTACGGTGTCAAGGCGAGCTCGGGCGGAGGGCGCAGCTCGGCCCGG 665 Query 18442 GAGACCCTCATGCGCGTCGCCGCCGGCGCGGTCGCCGAGAA 18482 |||||| || |||||||| || || ||||| || ||||| Sbjct 666 GAGACCATCGGACGCGTCGCTGCGGGTGCGGTTGCTGAGAA 706 Score = 120 bits (132), Expect = 4e-21 Identities = 111/141 (79%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 19052 CATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAGCCGTG 19111 |||||||||||| ||||| || ||| || |||||| || ||||||||||| || Sbjct 992 CATCGGCGGCACCGTGACCTGTGTGATCCGGGGCGTGCCCATCGGTCTCGGCGAGCCCTG 1051 Query 19112 CTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACCAAGGG 19171 |||||||||| ||||||| |||||||||||| ||||| || ||||| |||||||||| Sbjct 1052 CTTTGACAAGCTCGAGGCAAAGCTCGCCCACGCGATGCTCTCCATCCCCGCCACCAAGGC 1111 Query 19172 ATTCGAGATTGGCAGCGGGTT 19192 |||||| | ||| ||| || Sbjct 1112 CTTCGAGGTCGGCTCCGGCTT 1132 >seq2399 Length=11591 Score = 172 bits (190), Expect = 7e-37 Identities = 274/393 (70%), Gaps = 15/393 (4%) Strand=Plus/Minus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 ||||||||||||||| || |||| ||| ||||| || |||||||| || | ||||||||| Sbjct 3621 CTGGTCGACGTAGCGAGCGGTGTTGTTGAAGACTCGAAGCATGGGAACAATGCCGTTGGA 3562 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 |||||||||| || || | ||| | ||||| | | || | ||| | | || Sbjct 3561 GACGCCGTTGGTTCCAGCAATGTAAGAGCCGGTGCCTCGGATGCAGTGAATGTTGAGCCC 3502 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 |||||| ||||||| |||| ||| | ||||| ||||| |||||||||||||| || Sbjct 3501 GATGCCACCGGCCGTCTTGCTGATCATGGCGCAAGTCTTGAGGGTGTCGTAGATGCCGTC 3442 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 ||| ||||| ||||||| || || ||||| || || | || || | | || || Sbjct 3441 GATGGAGTCATCCTTCATCGTGACCAGGAAGCAGGATGACATCTGGGGATTGGGTGTTCC 3382 Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364 ||| |||||||| ||||||| || |||||| ||| | ||||||| || ||| || Sbjct 3381 GGCATTGAAGAGGGTGGGCGAGGCGTGGGTGAAGTACTTCTCCGACATGAGGTTGTAAGT 3322 Query 1630365 GGCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGGCGAC 1630424 | ||| ||| | || |||| || ||| | ||||| |||||| Sbjct 3321 GTCGA------TGGCCTGGTCAATGTCC-CG--------CCCGTGAATGCCGACGGCGAC 3277 Query 1630425 GCGCATGAGCATGTACTGGGGCCGCTCGACGAC 1630457 ||||||||||| | || |||| |||| |||| Sbjct 3276 TCGCATGAGCATATGTTGCGGCCTCTCGGCGAC 3244 Score = 96.9 bits (106), Expect = 4e-14 Identities = 103/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 1628465 TCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTGA 1628524 |||| || ||||| ||||| || || || || ||||||||||||||||||||| ||| Sbjct 3757 TCCAAAGGGCGTAGAAGAGCTCACGGGCGCGAACCTCCTCCTTGCCGTGGTTCTTCCTGA 3698 Query 1628525 GGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCT 1628584 ||||||| | |||| | ||| | |||||| ||||| | |||| |||||| || ||| Sbjct 3697 GGTCGAGGAACTCGAAGACGTCCGAGTGCCAAGGCTCAATGTAGATGGCAAAAGCCCCCG 3638 Query 1628585 TGCGCTTGCCGCCGCC 1628600 |||||| ||| || Sbjct 3637 GTCGCTTGTTGCCACC 3622 Score = 93.3 bits (102), Expect = 5e-13 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 1627868 CGTCGGCGAGGCCCTGCACGCCGACGCCCATCGGCCGGTGGCGCAGGTTCGAGTGGCGGG 1627927 |||| ||||| || | || |||| ||| || || |||||||||| |||||| | || Sbjct 4303 CGTCTGCGAGACCGTTGACTCCGATGCCGATGGGGCGGTGGCGCATGTTCGACTTCTTGG 4244 Query 1627928 CCTCGGGCACCGGGTAGTGGTTGATGTCGATCACGCGGTTGAGGTTGCCCACCACGACCT 1627987 |||||||||| ||||||| ||| | |||||| | |||||||||||| ||||||| Sbjct 4243 CCTCGGGCACAGGGTAGTAGTTCACGTCGATGATCTTGTTGAGGTTGCCACAGACGACCT 4184 Query 1627988 GGACGATCTCGTGCAG 1628003 | || |||||| || Sbjct 4183 TGGTGACCTCGTGAAG 4168 >seq2181 Length=22295 Score = 161 bits (178), Expect = 1e-33 Identities = 213/288 (74%), Gaps = 7/288 (2%) Strand=Plus/Plus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| ||||| || ||||| | |||||| || | ||||||||||||||| |||||||| Sbjct 13449 ACCCTCGTCTCGGCTGATGAGCTCGTTGGAGAACGTGAGGCCGGGCATGAGACCGCGCTT 13508 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 ||||||||| ||||||| | || || ||||| ||||||||||| |||||||| || Sbjct 13509 CTTGAGCCAGAAGATGGAGGCAAAGGACCCAGAGAAGAAGATGCCCTCCACGGCGGCGAA 13568 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCA 869358 | |||| | ||||| |||||| ||||| | | | |||||||||| ||| ||||| Sbjct 13569 GGCGATCAATCGCTCAGCAAAG--GTCGATTCGGT-GTCGTTGATCCACCGCATGGCCCA 13625 Query 869359 GTCGGCCTTTTTCCTCACCGAC-GGCACCGTGTCGATGGCGCGAAAGAGGTGGTC-CTTT 869416 |||||||||| | | | |||| || | || || ||||| |||||||| ||| | || Sbjct 13626 CTCGGCCTTTTGCTTGA-CGACAGGGATGGTCTCCATGGCATCAAAGAGGTAGTCGCGTT 13684 Query 869417 TCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTCC 869464 | | ||||| | || |||||||| || || || || |||||| Sbjct 13685 GCTG-AGGGTCGCGAATGTATGTGTCGATGAGCAGAGAGTATGTCTCC 13731 Score = 125 bits (138), Expect = 9e-23 Identities = 180/253 (71%), Gaps = 3/253 (1%) Strand=Plus/Plus Query 869631 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTT 869690 ||||||| |||||||| || ||||||||||||||| ||| | ||||||| ||| Sbjct 13730 CCGAGTGAATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGAGCCTCTGCTGCTT 13789 Query 869691 GGACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGA 869750 | |||||| | ||||| || | ||||||||| || || ||||| || |||| Sbjct 13790 GCACCTCCGAACTAAACCGCTCGACGAGGTTCTCGTTGACAATACCGTCTGATGCTGCGA 13849 Query 869751 AAAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGC---GACACCCAGT 869807 | || || |||||||| |||||||||| ||||| | |||| | | | |||||| Sbjct 13850 AGAAGGCGAGGACGTGGCTGATAAAGTGACGCTCATTGTCGTTCAACTTGTTGTCCCAGT 13909 Query 869808 GGACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTT 869867 | |||| | ||||| | |||||| || ||||||| ||| ||||| ||||| | Sbjct 13910 CGTGCATGTCCTTGGAAAGGTCGATCTCCTCAGCAGTCCAGAACGATGCCTCTGCCTTCT 13969 Query 869868 TGTACATCTCCCA 869880 ||||||| | ||| Sbjct 13970 TGTACATTTGCCA 13982 Score = 118 bits (130), Expect = 1e-20 Identities = 205/292 (70%), Gaps = 7/292 (2%) Strand=Plus/Plus Query 868721 AAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGGCGTC 868780 |||||||| ||||| || | || ||||| |||||| | ||| || || | || Sbjct 13165 AAAAAGTTAGTCTTTCCTTGCAGAGAGATGTTCTCCATGAAGTCGAAGGGATTTGTCGCA 13224 Query 868781 TTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCGGTCGGCGACAAACTCGATGTAC 868840 ||||||||||| ||| ||||| | | ||||| ||||||||||||||||||||||| Sbjct 13225 TTGTAGTGCTTCTCGTTGCCGAGGGCGACCAGCAGTCGGTCGGCGACAAACTCGATGTAT 13284 Query 868841 TGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCCACCGGCAGCGACTCGCTCACAAAC 868900 |||| ||| || | ||||||||||||||| | | ||||||| || | | || Sbjct 13285 TGGCTCATCAGACGGGCGTTCATGCCGATCAATGAACATGGCAGCGCATCAGTGAGGAAG 13344 Query 868901 TCTTTCTCGATCTCGACGGCCTCGACGATGATCTGCCTGGGCACGTC-GGCCGAGG--GC 868957 ||| |||||| ||| || ||| | ||||| || | || || || | || || Sbjct 13345 GCTTGCTCGATGGTGACAGCTTCGCCAATGATGCGCAAGACGACCTCAGGGTGTGGGCGC 13404 Query 868958 TTGTTGACGAGCATCGTGTAGAGCAGGCAGGCAAAGTCGCAGTGCA-ACCCT 869008 || |||| || | || |||| ||||| ||||||||| ||||| ||||| Sbjct 13405 TTCTTGA-GATGA--CTGAAGAGTAGGCACGCAAAGTCGGTGTGCAGACCCT 13453 >seq935 Length=42169 Score = 129 bits (142), Expect = 7e-24 Identities = 158/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 1573971 GCCGTGCTCGAACTCAACGCGTCGGACGAGCGCGGCGTCGACGTCGTGCGCAAGATCATC 1574030 ||||| ||||| || |||||||| |||||||| || |||||||||| || || | ||| Sbjct 34837 GCCGTCCTCGAGCTGAACGCGTCCGACGAGCGAGGAATCGACGTCGTCCGGAATAAGATC 34778 Query 1574031 AAGCACCACGCCTCCAAGAGGATCGACCTGCCGCCCGGACGCCACAAGGTGATCATCCTC 1574090 ||| | ||| || | || ||| |||||||| || |||||| | ||||||||| Sbjct 34777 AAGAGCTTTGCCCAAAAAACAGTCACCCTACCGCCCGGCCGGCACAAGCTCATCATCCTC 34718 Query 1574091 GACGAGGCCGACTGCCTCACGTCGGCGGCCCAGCAGGCCCTGCGGTCCACCATGGAAAAG 1574150 ||||| |||||| || | || || | ||||||||||| || || |||||||| | Sbjct 34717 GACGAAGCCGACAGCATGACCTCAGGAGCCCAGCAGGCGCTCCGACGGACCATGGAGATC 34658 Query 1574151 CACACCAACACGACGCGCTTTGCCCTGGCGTGCAAC 1574186 || ||| |||||| ||||| | | ||||| ||| Sbjct 34657 TACTCCAGCACGACCCGCTTCTGCTTTGCGTGTAAC 34622 >seq1079 Length=40219 Score = 111 bits (122), Expect = 2e-18 Identities = 120/159 (75%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 509036 CCCGAGAGCCGCGGCTTTGTGCGCAACTCGTACGAGCGCGGCCTCAACTCGCGCGAGATG 509095 ||||| ||||| ||||||||| ||||||||| |||||| || | | ||| || | Sbjct 30003 CCCGAAAGCCGTGGCTTTGTGGAGAACTCGTACCTGCGCGGTCTGACCGCGCAGGAATTC 30062 Query 509096 TTTCTGCACATGATCGGCGGGCGCGAGGGCCTCGTCGACACGGCCGTCAAGACGGCCGAG 509155 || | ||| || | ||| || || || || | |||||||| ||||||||||| ||| Sbjct 30063 TTCTTCCACGCCATGGCCGGTCGGGAAGGTCTGATTGACACGGCTGTCAAGACGGCTGAG 30122 Query 509156 ACGGGCTACATCCAGCGCCGGTGCATCAAGTCGATGGAG 509194 |||||||||||||||||||| | |||||| || | ||| Sbjct 30123 ACGGGCTACATCCAGCGCCGCTTGATCAAGGCGCTCGAG 30161 Score = 91.5 bits (100), Expect = 2e-12 Identities = 125/175 (71%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 507714 TCAACCTGGCCGTCACGGGCACCTACAACGCCGACTTTGACGGCGACGAGATGAACCTGC 507773 ||||||| | |||||| | ||||| ||||||||||||||||||||||||||| ||| Sbjct 29029 TCAACCTTTCGGTCACGCCTCCGTACAATGCCGACTTTGACGGCGACGAGATGAACTTGC 29088 Query 507774 ACGTGCCCCAGTCCGAGACGGCGCGCGCCGAGGTGACGCACACCATGAGCGTGTCGCTCA 507833 | || || ||| |||| | | || || ||| | | || | | | || ||| | Sbjct 29089 ATGTACCGCAGAGCGAGGAGACCCGAGCTGAGCTCAGCCAGATCGCCTGGGTCGCGCGGA 29148 Query 507834 AGACCGTGTCGCCGCAGGCCAACAAGCCCATCATCGGCCTGGTCATGGACGCCCT 507888 | | ||||| |||||||| ||||||||| | || ||| | || |||| |||| Sbjct 29149 ACATTGTGTCCCCGCAGGCGAACAAGCCCGTGATGGGCATCGTGCAGGACACCCT 29203 >seq1 Length=203074 Score = 111 bits (122), Expect = 2e-18 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||| ||||| ||| | | |||||| || ||||| || ||||||||||| | || Sbjct 190174 GCTTGGAAAGTTCACCGGGGAGGATCAGCCGGACGGCCGTTTGGATCTCGCGGGCAGAGA 190233 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || |||||| || || || | |||||||| | ||||||| |||| | Sbjct 190234 TGGTCGACTTCTTGTTGTAGGATGCAAGCTTGGAGGCCTCGGAGGCGATGCGCTCGAAGA 190293 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| | |||||| ||||| | || | ||| | |||||| ||||| || |||||||| Sbjct 190294 TGTCCTGGACAAAGGAGTTGAGGATGGCCATGGCCTTGTTTGAGATACCAGTGTCGGGGT 190353 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 ||||||||||||| || ||||||| Sbjct 190354 GCACCTGCTTGAGGACACGGTAGATG 190379 >seq1986 Length=1087 Score = 96.9 bits (106), Expect = 4e-14 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||| |||||| || ||| ||||| || ||||| || |||||||| || | | | Sbjct 330 GCTTGGACAGTTCACCCGGCAAGATCAACCGAACGGCAGTTTGGATCTCCCGTGCGGAAA 271 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| | |||||| | |||||| | || || | ||||||| || | | Sbjct 270 TGGTGCTCTTCTTGTTGTACGACGCCAGCTTGGACGCTTCCGACGCGATGCGCTCAAAGA 211 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| | || |||||||||| || || ||| | |||||||||||||||| ||| |||| Sbjct 210 TGTCTTGCACGAACGAGTTCAGGATCGCCATGGCCTTGTTGGAGATGCCCGTGTCTGGGT 151 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | || ||||| || || ||||||| Sbjct 150 GGACTTGCTTCAGGACGCGGTAGATG 125 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106902197195496