Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20caries_20[genbank_20GCA_5F001645005.1_202016-05-16] 2,888 sequences; 29,540,861 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq2399 188 6e-43 seq2114 132 4e-26 seq2269 129 5e-25 seq2456 96.9 3e-15 >seq2399 Length=11591 Score = 188 bits (208), Expect = 6e-43 Identities = 973/1519 (64%), Gaps = 50/1519 (3%) Strand=Plus/Minus Query 138501 GTTTATGACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGG 138560 ||| | ||| || || || || |||| || || || ||| | |||| | ||| |||| Sbjct 4686 GTTGACGACTTGGAACTCGCCAGCCAGCACACGGCGGGTGTACAGGTTGCTCGTGTAAGG 4627 Query 138561 CTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCAC 138620 |||||| | |||||| ||||| |||||| ||| | || |||||||| || | Sbjct 4626 CTCAAAGCACTCGTTGAAGCCCAGGATCTGACTCGTCGAGGCCGTCGGCATAGGTGCGAG 4567 Query 138621 CAAAAGAGAATTCCGTAAACCGTG--AAGCT-TGATTCGTTCCTTGAGCGACGACCAGTC 138677 ||| || || ||||| | |||||| | || || | || ||||| | | |||||| Sbjct 4566 CAACAGCGAGTTCCGGAGACCGTGCGAGGCAATGTTGCG---CTTGATCTCAGCCCAGTC 4510 Query 138678 CCACAAATCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGG 138737 ||| | | |||| || | | |||||| |||||||| | | ||| || || || Sbjct 4509 CCAAAGACCGCTGGGGGTAACGCACCACATGTCGTACTGGAGCTCGCCCTTGCTGGCCGG 4450 Query 138738 ACTGCCTTCGTACGAATCGTATACACCAAACTCTTGCGCCAACTCGTT-GCTCGCCTCGA 138796 | ||| ||||| | ||||| || | ||| | || | |||| | |||| || | Sbjct 4449 GCAGCCCTCGTATGTCTCGTAGGTCCCGAGCTCCTTGGCAAGCTCGCACGATCGC-TCAA 4391 Query 138797 GCGCACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCT 138856 | || | | ||| || || ||| ||||| |||||| |||||||| || | Sbjct 4390 GAGCGGCGTGGTAGATGGTCTCGAAGATCTGAATGTTGAGCTTCTTGGCCTCGGGACTGT 4331 Query 138857 CGTACGGCAT-GCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACA 138915 | | ||| | || | ||| |||| ||||| || || || | || || | |||| Sbjct 4330 CAAA-GGCGTAGCCCATGATCATGAATGCGTCTGCGAGACCGTTGACTCCGATGCCGATG 4272 Query 138916 GGGCGATGGCGCAGATTTGACGCTTTTGCGGCTTCG---ATAGGATAATAGTTTACATCG 138972 ||||| ||||||| || ||| || ||| ||| | ||| || ||||| || ||| Sbjct 4271 GGGCGGTGGCGCATGTTCGACTTCTT---GGCCTCGGGCACAGGGTAGTAGTTCACGTCG 4215 Query 138973 ATGATTTTGTTTAAATTTCGCAC-GACCACCTTAGTCGTATGCTTTAATCGT-TCAAAAT 139030 ||||| ||||| | || | ||| ||| ||||| || | | | || | | | || | Sbjct 4214 ATGATCTTGTTGAGGTTGC-CACAGACGACCTTGGTGACCT-CGTGAAGCTTCTTGAAGT 4157 Query 139031 CGTATGTGCCCCCGTTGTCGTCGACGACGTCGACAA--ATTT--GTTGACACAA--ATCG 139084 | ||||| | | |||| || ||| |||| | || | || | || | || Sbjct 4156 CATATGTCCTCGTGTTG--GTTTGCGA-GTCGTAATGGATGTAGGTCGGCAGAGCCATAC 4100 Query 139085 AGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACA 139144 ||| | |||||| || || || ||||| || ||||||| || | || || | || | Sbjct 4099 TGGCAAGGTTGCAGACAGCGACCTCGTCCGGAGCGCTGTACTCTATGATCTCCGTGCAAA 4040 Query 139145 AATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTT 139204 ||| |||||| || || | || | || || || ||||| ||| || | Sbjct 4039 GGTTAGAGTTCTTGATGGTGCCGAGGTTCTTCTGGTTCGACTTGCGGTTGGCAGCGTCCT 3980 Query 139205 TGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAAGT 139264 |||||||||| | || ||||||| ||| || | ||| | || | | | | | Sbjct 3979 TGTAAAGCATGAAAGGGTTGCCAGTCTCCGTCTGGGCCTCCAGAACGGCGTACCAGAGCT 3920 Query 139265 CCCTAGC-TTGTATTTGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCG 139323 | ||| ||| || || | | | | |||||||||||||| |||||||| | Sbjct 3919 TCTGAGCCTTGACCGTGCGGCGAGCAC-GACCCTCGCGCTCGTACTTCTCGTAGAGGGCC 3861 Query 139324 TCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGAC 139383 |||||| ||||| ||| |||| | |||| || | |||| | || |||||||||||| Sbjct 3860 TCGAATTCCTCACCATAGACGTCGGCAAGACCGGGGCACTCAGCGGGGCACATGAGCGAC 3801 Query 139384 CATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGC---GAAC 139440 || | |||||| | ||| ||| ||||||||| || |||||||| | || ||| Sbjct 3800 CACTCTCCGTTCTGTTCGACTCGCTTCATGAACAAGTCGGGAATCCAAAGGGCGTAGAAG 3741 Query 139441 AGCAAATCGCGCGCCTTCTTATCTTCCGAACCCATGTTACGTTTCATGTTAAGGAAATCA 139500 ||| | || |||| | || ||| || ||| | | || ||||| || Sbjct 3740 AGCTCA-CGGGCGCGAAC--CTCCTCCTTGCCGTGGTTCTTCCTGAGGTCGAGGAACTCG 3684 Query 139501 AAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCC---TTTCCGTTTGCCA 139557 || ||||| | |||||| || || | |||||||| | || || | | |||||| Sbjct 3683 AAGACGTCCGAGTGCCAAGGCTCAATGTAGATGGCAAAAGCCCCCGGTCGCTTGTTGCCA 3624 Query 139558 CCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTC 139617 || || ||||||| || | | || ||||| || || | ||| || | | ||| | Sbjct 3623 CCCTGGTCGACGTAGCGAGCGGTGTTGTTGAAGACTCGAAGCATGGGAACAATGCCGTTG 3564 Query 139618 GCTGTTCCGTTGGTGCTACGGATG---GGACTGTTGCGAGCTCGGACGTCATGTACATTG 139674 | |||||||| | | ||| | | | ||| |||||| | || | ||| Sbjct 3563 GAGACGCCGTTGGTTCCAGCAATGTAAGAGCCGGTGC---CTCGGATGCAGTGAATGTTG 3507 Query 139675 ATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCAA-TCGCGTAATGTCTCGTATAT 139733 | ||||| || ||| | ||| || | ||||| || | | || ||||| || Sbjct 3506 AGCCCGATGCCACCGGCCGTCTTGCTGATCATGGCGCAAGTCTTG-AGGGTGTCGTAGAT 3448 Query 139734 ACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGG-TAGTT 139792 || ||| ||| |||| |||||||||||| ||||| || || | || || | | Sbjct 3447 GCCGTCGATGGAGTCATCCTTCATCGTGACCAGGAAGCAGGATGACATCTGGGGATTGGG 3388 Query 139793 TCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAATT 139852 | || ||||| || || || || ||||| ||||| | | |||||| | | Sbjct 3387 T-GTTCCGGCATTGAAGAGGGTGGGCGAGGCGTGGGTGAAGTACTTCTCCGACATGAGGT 3329 Query 139853 CGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCA 139912 ||| || |||||||| |||| |||| ||||| || ||||| | ||||||||| | Sbjct 3328 TGTAAGTGTCGATGGCCTGGTCAATGTCCCGCCCGTGAATGCCGACGGCGACTCGCATGA 3269 Query 139913 GCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAtttttttCAGATAACCGTTCTCTA 139972 |||||||||| || ||||| ||| ||| | ||| ||||||| | ||| | Sbjct 3268 GCATATGTTGCGGCCTCTCGGCGACCTTGCCGTTGATGCGCAGCAGATAAGAGCGCTCGA 3209 Query 139973 GGGTCTTGTAGCCAAAGTA 139991 | |||||| |||| ||||| Sbjct 3208 GAGTCTTGAAGCCGAAGTA 3190 >seq2114 Length=91084 Score = 132 bits (146), Expect = 4e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || ||||| ||||| || || || || ||||| || ||| | | Sbjct 23152 ATGCAGATCTTCGTCAAGACGCTGACCGGCAAGACCATCACCCTCGAGGTTGAATCTTCA 23211 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||||||| ||||| || || || || || || ||| Sbjct 23212 GACACCATCGACAATGTCAAGACAAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAA 23271 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || |||||||||||||| || ||||| || || | | | || || || ||| Sbjct 23272 CAGCGCTTGATCTTTGCCGGCAAGCAGCTTGAAGACGGCCGTACTCTTTCGGACTACAAC 23331 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || |||||||| |||||||| |||||||| |||| | ||||| ||| Sbjct 23332 ATCCAAAAGGAGTCGACACTCCACTTGGTCCTGCGTCTCCGCGGTGGC 23379 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || ||||| ||||| || || || || ||||| || || | | Sbjct 22924 ATGCAGATCTTCGTCAAGACGCTGACCGGCAAGACCATCACCCTCGAGGTCGAGTCTTCA 22983 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||||||| ||||| || || || || || || ||| Sbjct 22984 GACACCATTGACAATGTCAAGACAAAGATCCAGGACAAGGAGGGCATTCCGCCGGACCAA 23043 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | ||||| ||||| || ||||| ||||| | | | || || || ||| Sbjct 23044 CAACGTCTCATCTTCGCCGGAAAGCAGCTTGAGGACGGTCGCACGCTCTCCGACTACAAC 23103 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| |||||||| |||||||| | || ||||||| || Sbjct 23104 ATCCAGAAGGAGTCGACACTCCACTTGGTCCTTCGCCTGCGCGGTGG 23150 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || ||||| || || || || ||||| || ||| | | Sbjct 18421 ATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTTGAATCATCG 18362 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | || | ||||| |||||||||||||| || || || || || || ||| Sbjct 18361 GACACAATCGACAACGTAAAGACGAAGATCCAAGACAAGGAGGGCATTCCCCCGGACCAA 18302 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || | ||||| || || || || || ||||| | | | | || || || ||| Sbjct 18301 CAGCGCCTCATCTTCGCAGGCAAGCAACTTGAGGACGGCCGCACCCTCTCTGACTACAAC 18242 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 ||||| ||||| || ||||| ||||||||| | || | ||||| ||| Sbjct 18241 ATTCAGAAGGAGTCCACACTCCACTTGGTGCTCCGTCTCCGCGGTGGC 18194 Score = 111 bits (122), Expect = 1e-19 Identities = 142/196 (72%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 24717 TTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAA 24776 |||| || || || || || || ||||| ||||| || || || | ||||| | || | Sbjct 18864 TTAAGACTCTTACTGGCAAGACCATTACCCTCGAGGTCGAGTCCTCAGACACCATCGACA 18805 Query 24777 CGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCT 24836 || || |||||||| ||||| || || || ||||| || ||||||||| |||||| Sbjct 18804 ATGTCAAGACCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAACAACGTCTGATCT 18745 Query 24837 TTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAAT 24896 ||||||| || ||||| ||||| | | | || || || ||||| |||||||| | Sbjct 18744 TTGCCGGCAAGCAGCTTGAGGACGGTCGCACGCTCTCCGACTACAACATCCAAAAGGAGT 18685 Query 24897 CGACACTACACTTGGT 24912 | || || |||||||| Sbjct 18684 CCACTCTCCACTTGGT 18669 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || || || ||||||||||| ||| | | Sbjct 18649 ATGCAGATCTTCGTCAAGACCCTGACTGGCAAGACGATCACGCTCGAAGTCGAATCTTCA 18590 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| |||||||| || || || || || ||| Sbjct 18589 GACACCATTGACAATGTCAAGACCAAGATCCAGGACAAAGAGGGCATTCCCCCGGACCAA 18530 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | ||||| ||||| || ||||| || || | | | || || || ||| Sbjct 18529 CAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAAGACGGCCGTACTCTTTCGGACTACAAC 18470 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || || ||||| || || || |||||||| Sbjct 18469 ATCCAGAAGGAGTCTACGCTCCACTTGGT 18441 >seq2269 Length=80277 Score = 129 bits (142), Expect = 5e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || || || || || || || ||||| || || | || Sbjct 52418 ATGCAGATCTTTGTGAAGACTCTCACAGGCAAGACGATCACCCTCGAGGTGGAGTCATCC 52477 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| || || |||||||||||||| || || || ||||| || || Sbjct 52478 GACACGATTGACAACGTCAAGAC-CAAGATCCAAGACAAGGAGGGCATCCCTCCGGACCA 52536 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| ||| | ||||||||||| || ||||| || || ||| |||| || || || Sbjct 52537 ACAGCGTCTCATCTTTGCCGGCAAGCAGCTCGAAGACGGCCGAACGCTGTCGGACTACAA 52596 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| || ||||||||||| || ||| | || |||| ||||||| || Sbjct 52597 CATCCAGAAGGAATCGACCCTGCACCTCGTCCTGCGTCTGCGCGGCGG 52644 >seq2456 Length=10261 Score = 96.9 bits (106), Expect = 3e-15 Identities = 117/157 (75%), Gaps = 2/157 (1%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | || || || ||||| || || || || ||||| || || || | Sbjct 1321 GATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACGATCACCCTCGAGGTGGAGTCCTC 1262 Query 24763 CGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821 |||||| | || |||| || || || |||||| ||||| || || || || || || | Sbjct 1261 CGACACCATCGACAACGTCAAGACCAA-GATCCAGGACAAGGAGGGGATCCCCCCGGACC 1203 Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA 24858 | || || | ||||||||||| |||||||| ||||| Sbjct 1202 AGCAGCGGCTCATCTTTGCCGGAAAACAGCTCGAGGA 1166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449881358696640