Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20caries_20[genbank_20GCA_5F001645005.1_202016-05-16] 2,888 sequences; 29,540,861 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq2181 179 6e-39 seq1 152 8e-31 seq2399 149 1e-29 seq1986 132 8e-25 seq935 127 3e-23 seq990 122 1e-21 seq1857 113 7e-19 seq1079 107 3e-17 seq2295 98.7 2e-14 >seq2181 Length=22295 Score = 179 bits (198), Expect = 6e-39 Identities = 242/330 (73%), Gaps = 9/330 (3%) Strand=Plus/Plus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 ||| ||||| || ||||| | |||||| || ||||||||||||||| |||||||| Sbjct 13449 ACCCTCGTCTCGGCTGATGAGCTCGTTGGAGAACGTGAGGCCGGGCATGAGACCGCGCTT 13508 Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCC-GAGAAAAAGATGCCCTCGACGGCGGCAA 794458 ||||||||| ||||||| | ||| ||| ||||| ||||||||||| |||||||| | Sbjct 13509 CTTGAGCCAGAAGATGG-AGGCAAAGGACCCAGAGAAGAAGATGCCCTCCACGGCGGCGA 13567 Query 794459 AGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCC 794518 || ||| | ||||| ||||| ||| | | | | |||||||||| ||| |||| Sbjct 13568 AGGCGATCAATCGCTCAGCAAA--GGTCGATTCGGT-GTCGTTGATCCACCGCATGGCCC 13624 Query 794519 ACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGT--CCTT 794576 |||| ||||||| | | || || | || || ||||| |||||||| || | || Sbjct 13625 ACTCGGCCTTTTGCTTGACGACAGGGATGGTCTCCATGGCATCAAAGAGGTAGTCGCGTT 13684 Query 794577 CTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTT 794636 || ||||| | ||| ||||||||||| || ||||| ||||| ||||| ||||| Sbjct 13685 GCTGA--GGGTCGCGAATGTATGTGTCGATGAGCAGAGAGTATGTCTCCGAGTGAATGTT 13742 Query 794637 TTCGATGGCGATCTGGAAGCCATAAAAGCA 794666 || || |||||||||||| || ||||| Sbjct 13743 CTCCATCATGATCTGGAAGCCGTAGAAGCA 13772 Score = 107 bits (118), Expect = 3e-17 Identities = 150/210 (71%), Gaps = 3/210 (1%) Strand=Plus/Plus Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209 ||||| | | |||| |||||| | || || || | |||||||| || || ||| Sbjct 13777 GCCTCTGCTGCTTGCACCTCCGAACTAAACCGCTCGACGAGGTTCTCGTTGACAATACCG 13836 Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269 || || ||||| |||||||||||||| |||||||||||||||| | |||| | | | Sbjct 13837 TCTGATGCTGCGAAGAAGGCGAGGACGTGGCTGATAAAGTGACGCTCATTGTCGTTCAAC 13896 Query 796270 ---GAGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAG 796326 | |||||| | | |||| | ||||||| |||||| || ||||| || || Sbjct 13897 TTGTTGTCCCAGTCGTGCATGTCCTTGGAAAGGTCGATCTCCTCAGCAGTCCAGAACGAT 13956 Query 796327 GCCTCGGCCTTTTTGTACATCTCCCATATC 796356 ||||| ||||| |||||||| | ||| ||| Sbjct 13957 GCCTCTGCCTTCTTGTACATTTGCCAGATC 13986 Score = 89.7 bits (98), Expect = 8e-12 Identities = 148/213 (69%), Gaps = 3/213 (1%) Strand=Plus/Plus Query 793929 AAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTC 793988 |||||||| ||||| || | || ||||| |||||| | ||| || || | || Sbjct 13165 AAAAAGTTAGTCTTTCCTTGCAGAGAGATGTTCTCCATGAAGTCGAAGGGATTTGTCGCA 13224 Query 793989 AGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTAC 794048 ||||||||||||| ||||| | | ||||| ||||||||||| || || ||||| Sbjct 13225 TTGTAGTGCTTCTCGTTGCCGAGGGCGACCAGCAGTCGGTCGGCGACAAACTCGATGTAT 13284 Query 794049 TGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAAC 794108 |||| ||| || ||||||||||||||| | | ||||||| || ||| || Sbjct 13285 TGGCTCATCAGACGGGCGTTCATGCCGATCAATGAACATGGCAGCGCATCAGTGAGGAAG 13344 Query 794109 TCTTTCTCGATCTCGACGGCCTCG---ATGATG 794138 ||| |||||| ||| || ||| |||||| Sbjct 13345 GCTTGCTCGATGGTGACAGCTTCGCCAATGATG 13377 >seq1 Length=203074 Score = 152 bits (168), Expect = 8e-31 Identities = 174/234 (74%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 |||||||||||| | ||||||||| || |||| ||||||| ||| ||||| ||| | | Sbjct 190136 GTACTTGGTGACCGACTTGGTACCTTCGGAGATGGCGTGCTTGGAAAGTTCACCGGGGAG 190195 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590 |||||| || ||||| || ||||||||||||| ||| || |||||| | Sbjct 190196 GATCAGCCGGACGGCCGTTTGGATCTCGCGGGCAGAGATGGTCGACTTCTTGTTGTAGGA 190255 Query 1485591 CGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCAT 1485650 || || | |||||||| | ||||||| |||| ||||| | |||||| ||||| | Sbjct 190256 TGCAAGCTTGGAGGCCTCGGAGGCGATGCGCTCGAAGATGTCCTGGACAAAGGAGTTGAG 190315 Query 1485651 GATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 ||| | ||| | ||||| ||||| || ||||||||||||||||||||| || Sbjct 190316 GATGGCCATGGCCTTGTTTGAGATACCAGTGTCGGGGTGCACCTGCTTGAGGAC 190369 >seq2399 Length=11591 Score = 149 bits (164), Expect = 1e-29 Identities = 189/260 (73%), Gaps = 0/260 (0%) Strand=Plus/Minus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 ||||||||| ||||| || |||| ||| ||||| || |||||||| |||| ||||||||| Sbjct 3621 CTGGTCGACGTAGCGAGCGGTGTTGTTGAAGACTCGAAGCATGGGAACAATGCCGTTGGA 3562 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 |||||||||| || || | ||| | ||| | | | || | ||| | | || Sbjct 3561 GACGCCGTTGGTTCCAGCAATGTAAGAGCCGGTGCCTCGGATGCAGTGAATGTTGAGCCC 3502 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 |||||| ||||||| |||| ||| | ||||| | || || || ||||||||||| || Sbjct 3501 GATGCCACCGGCCGTCTTGCTGATCATGGCGCAAGTCTTGAGGGTGTCGTAGATGCCGTC 3442 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779 ||| ||||| ||||||| | ||| ||||| || || | || || | || || Sbjct 3441 GATGGAGTCATCCTTCATCGTGACCAGGAAGCAGGATGACATCTGGGGATTGGGTGTTCC 3382 Query 2073780 GGCATTGAAGAGCGTGGGCG 2073799 |||||||||||| ||||||| Sbjct 3381 GGCATTGAAGAGGGTGGGCG 3362 Score = 107 bits (118), Expect = 3e-17 Identities = 153/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 2071801 AGGCCGGGCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGC-CAGTCACCACGCGGCG 2071859 || ||||| ||| | ||||| | ||||||||| || ||| | || | || || Sbjct 3833 AGACCGGGGCACTCAGCGGGGCACATGAGCGACCACTCTCCGTTCTGTT-CGACTCGCTT 3775 Query 2071860 CATAAACAGGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTT 2071919 ||| |||| |||| |||| ||| |||| ||||| || || || || ||||||||| Sbjct 3774 CATGAACAAGTCGGGAATCCAAAGGGCGTAGAAGAGCTCACGGGCGCGAACCTCCTCCTT 3715 Query 2071920 GCCGTGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTA 2071979 |||||||||||| | |||||||| | |||| || ||| | |||||| ||||| | ||| Sbjct 3714 GCCGTGGTTCTTCCTGAGGTCGAGGAACTCGAAGACGTCCGAGTGCCAAGGCTCAATGTA 3655 Query 2071980 GCAGGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 2072012 | |||||| || ||| |||||| ||| || Sbjct 3654 GATGGCAAAAGCCCCCGGTCGCTTGTTGCCACC 3622 Score = 86.0 bits (94), Expect = 1e-10 Identities = 95/125 (76%), Gaps = 4/125 (3%) Strand=Plus/Minus Query 2070124 ATCATGGCAAACGCGTCGGCCAGGCCCTGCACGCCGACGCCCATCGGCCGGTGGCGCAGG 2070183 |||||| || ||||| || || || | || |||| ||| || || |||||||||| | Sbjct 4313 ATCATG---AATGCGTCTGCGAGACCGTTGACTCCGATGCCGATGGGGCGGTGGCGCATG 4257 Query 2070184 TTCGAGTGCCGGGCCTCGGGCACCGGGTAGTGGTTGATGTCGATCACGCGGTTGAGGTTG 2070243 ||||| | | |||||||||||| ||||||| ||| | |||||| | ||||||||| Sbjct 4256 TTCGACTTCTTGGCCTCGGGCACAGGGTAGTAGTTCACGTCGATGATCTTGTTGAGGTT- 4198 Query 2070244 GCCAC 2070248 ||||| Sbjct 4197 GCCAC 4193 >seq1986 Length=1087 Score = 132 bits (146), Expect = 8e-25 Identities = 172/235 (73%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 ||||||||| || | ||||||||| || |||| |||||| ||| |||||| || ||| Sbjct 368 GTACTTGGTCACCGACTTGGTACCTTCCGAGATCGCGTGCTTGGACAGTTCACCCGGCAA 309 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590 ||||| || ||||| || |||||||| || | | || ||| | |||||| || || Sbjct 308 GATCAACCGAACGGCAGTTTGGATCTCCCGTGCGGAAATGGTGCTCTTCTTGTT-GTACG 250 Query 1485591 -CGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||| | || || | ||||||| || | ||||| | || |||||||||| Sbjct 249 ACGCCAGCTTGGACGCTTCCGACGCGATGCGCTCAAAGATGTCTTGCACGAACGAGTTCA 190 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 ||||| ||| | ||||||||||||||| ||| ||||| || ||||| || || Sbjct 189 GGATCGCCATGGCCTTGTTGGAGATGCCCGTGTCTGGGTGGACTTGCTTCAGGAC 135 >seq935 Length=42169 Score = 127 bits (140), Expect = 3e-23 Identities = 148/200 (74%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 2019108 GCCGTGCTCGAACTCAATGCGTCAGACGAGCGCGGCGTGGACGTCGTGCGTAGAATCATC 2019167 ||||| ||||| || || ||||| |||||||| || | |||||||| || | | ||| Sbjct 34837 GCCGTCCTCGAGCTGAACGCGTCCGACGAGCGAGGAATCGACGTCGTCCGGAATAAGATC 34778 Query 2019168 AAGCATCACGCTTCGAAAAGAATCGACCTGCCGCCCGGCCGCCACAAGGTGATCATCCTC 2019227 ||| || |||| | || ||| ||||||||||| |||||| | ||||||||| Sbjct 34777 AAGAGCTTTGCCCAAAAAACAGTCACCCTACCGCCCGGCCGGCACAAGCTCATCATCCTC 34718 Query 2019228 GATGAGGCCGACTGCCTTACGTCGGCGGCCCAGCAGGCCCTCCGATCGACCATGGAAAAG 2019287 || || |||||| || | || || | ||||||||||| |||||| ||||||||| | Sbjct 34717 GACGAAGCCGACAGCATGACCTCAGGAGCCCAGCAGGCGCTCCGACGGACCATGGAGATC 34658 Query 2019288 TACACCAACACGACGCGGTT 2019307 ||| ||| |||||| || || Sbjct 34657 TACTCCAGCACGACCCGCTT 34638 >seq990 Length=40865 Score = 122 bits (134), Expect = 1e-21 Identities = 180/249 (72%), Gaps = 6/249 (2%) Strand=Plus/Minus Query 429509 GCTCCAGATCGGGTGGACCGTCGAGCGCCACCTGCGCACCGGCGACCCCGTGGTCATGAA 429568 ||||| ||||| ||||||||||||||| ||||| ||||||| ||| || | || Sbjct 27823 GCTCCGCATCGGAGATACCGTCGAGCGCCACTTGCGCGACGGCGACATCGTCCTCTTCAA 27764 Query 429569 CCGGCAGCCGTCGCTCCACATGGGGTCGATGCTCAACCACAAGGTGGTGCCCATGCCCGG 429628 ||||||||| || || |||| | |||||| | | |||| | | || |||| | Sbjct 27763 CCGGCAGCCCTCCCTGCACAAGTTGTCGATCATGAGCCACCGCGCCAAGATCAGGCCCTG 27704 Query 429629 TCGCACCTTCCGGCTCAACCTGGCCGTGACGG-GCACCT-ACAACGCCGACTTTGACGGC 429686 ||||| ||||| | ||| | ||| | | | |||| |||| |||||||||||||| Sbjct 27703 GCGCACGTTCCGCTTGAACGAGT--GTGCCTGTGGACCTTACAATGCCGACTTTGACGGG 27646 Query 429687 GACGAGATGAACCTGCACGTGCCCCAGTCGGAGATGGCACGCGCCGAAGTCGCCCACAC- 429745 |||||||||||| ||||||| |||||| | ||| ||| ||| | | || | |||| | Sbjct 27645 GACGAGATGAACATGCACGTACCCCAGACCGAGGAGGCTCGCACAG-AGGCCACCACTCT 27587 Query 429746 CATGGGCGT 429754 |||||| || Sbjct 27586 CATGGGTGT 27578 >seq1857 Length=30104 Score = 113 bits (124), Expect = 7e-19 Identities = 199/286 (70%), Gaps = 7/286 (2%) Strand=Plus/Plus Query 2411386 TCAATCTTGGAGGCGGCCTCGCTGGCGCTCATCTTGCCGTCCTTGGTGAGGCCCGGCACC 2411445 || ||||| ||| | || || || |||||||||| |||| |||| || |||||| Sbjct 14023 TCGATCTTCGAGTCCGCGTCCGAGGAGCTCATCTTGGAC-CCTT--TGAGACCGGGCACC 14079 Query 2411446 AGCGGGTTGAGCAGGTGGATGCGCTTGCGGTAGCCCAGCGCCGGCAGGTGGTCGCGCGCA 2411505 | | || | ||| ||| ||||||| |||||| ||| |||||| || || Sbjct 14080 ATCTCATTCATCAGATGGGCGCGCTTGGCGTAGCCGAGCTTGGGCAGGATCTCCTCGGCG 14139 Query 2411506 AAGGCAAAGATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGCTGC 2411565 | | | |||||||| ||||||||| || || |||||| |||||| |||||| |||| Sbjct 14140 AGGACGAAGATCTTTCGCTGGTCGACACCTCCGAACTGGAAATCGACGCCGAGGTACTGC 14199 Query 2411566 TCGTCGAGGGCCTGCATGAGCGGGTAGACGAGGTTGCTGAGCGGCGGGTTGCGGTCCATC 2411625 |||||||| || || | |||||||| |||| | ||| ||| | | | || | Sbjct 14200 TCGTCGAGCGCTTGGAGACCCGGGTAGATGAGGCCGGAGAGTAGCGCGCTCGAGACCTGC 14259 Query 2411626 TTGACCACCTGGGCGGCGGCCT--TTTGCGCCGTGCCGACGGTCAC 2411669 || ||||||| |||| |||| | || ||| ||||| ||||||| Sbjct 14260 TTCACCACCTCGGCGCCGGCTTTCTTGGCGTCGTGC--TCGGTCAC 14303 >seq1079 Length=40219 Score = 107 bits (118), Expect = 3e-17 Identities = 113/149 (76%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 431022 CCCGAGAGCCGCGGCTTTGTGCGCAACTCGTACGAGCGCGGCCTCAACTCGCGCGAGATG 431081 ||||| ||||| ||||||||| ||||||||| |||||| || | | ||| || | Sbjct 30003 CCCGAAAGCCGTGGCTTTGTGGAGAACTCGTACCTGCGCGGTCTGACCGCGCAGGAATTC 30062 Query 431082 TTTCTGCACATGATCGGCGGGCGCGAGGGTCTCGTCGACACGGCCGTCAAGACGGCCGAG 431141 || | ||| || | ||| || || ||||| | |||||||| ||||||||||| ||| Sbjct 30063 TTCTTCCACGCCATGGCCGGTCGGGAAGGTCTGATTGACACGGCTGTCAAGACGGCTGAG 30122 Query 431142 ACGGGCTACATCCAGCGTCGGTGCATCAA 431170 ||||||||||||||||| || | ||||| Sbjct 30123 ACGGGCTACATCCAGCGCCGCTTGATCAA 30151 Score = 100 bits (110), Expect = 5e-15 Identities = 207/306 (68%), Gaps = 14/306 (5%) Strand=Plus/Plus Query 429519 GGGTGGACCGTCGAGCGCCACCTGCGCACCGGCGACCCCGTGGTCATGAACCGGCAGCCG 429578 || |||| |||||||||||| || | |||||| | || | ||||||||||| Sbjct 28905 GGCTGGATCGTCGAGCGCCATCTCAAGAATGGCGACTTTATCCTCTTCAACCGGCAGCCT 28964 Query 429579 TCGCTCCACATGGGGTCGATGCTCAACCA------CAAGGTGGTGCCC-ATGCCCGGTCG 429631 |||||||||| | | ||| | ||| |||| | || | || ||| Sbjct 28965 TCGCTCCACAAGATGAGCATGATGTGCCATCGCATCAAGATTATGAACTAT------TCG 29018 Query 429632 CACCTTCCGGCTCAACCTGGCCGTGACGGGCACCTACAACGCCGACTTTGACGGCGACGA 429691 ||||||||||||||||| | || ||| | ||||| |||||||||||||||||||| Sbjct 29019 -ACCTTCCGGCTCAACCTTTCGGTCACGCCTCCGTACAATGCCGACTTTGACGGCGACGA 29077 Query 429692 GATGAACCTGCACGTGCCCCAGTCGGAGATGGCACGCGCCGAAGTCGCCCACACCATGGG 429751 ||||||| |||| || || ||| ||| | | || || || || ||| | | | Sbjct 29078 GATGAACTTGCATGTACCGCAGAGCGAGGAGACCCGAGCTGAGCTCAGCCAGATCGCCTG 29137 Query 429752 CGTGGCCCTCAAGGCCGTGTCGCCGCAGGCCAACAAGCCCATCATCGGGCTCGTGATGGA 429811 || || | || ||||| |||||||| ||||||||| | || || ||||| ||| Sbjct 29138 GGTCGCGCGGAACATTGTGTCCCCGCAGGCGAACAAGCCCGTGATGGGCATCGTGCAGGA 29197 Query 429812 CGCCCT 429817 | |||| Sbjct 29198 CACCCT 29203 >seq2295 Length=15834 Score = 98.7 bits (108), Expect = 2e-14 Identities = 77/92 (84%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 |||||||||||| | |||||||||||| |||| ||||||| || |||||| ||| | | Sbjct 2933 GTACTTGGTGACCGACTTGGTACCCTCGGAGATGGCGTGCTTGTACAGTTCACCGGGGAG 2874 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGG 1485562 |||||| || ||||| || ||||||||||||| Sbjct 2873 GATCAGCCGGACGGCCGTTTGGATCTCGCGGG 2842 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915939190267832