Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20caries_20[genbank_20GCA_5F001645005.1_202016-05-16] 2,888 sequences; 29,540,861 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq2746 82.4 9e-11 >seq2746 Length=6115 Score = 82.4 bits (90), Expect = 9e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 147232 AGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCTGGCCCCAAAG 147291 ||||| || ||||| |||||| |||||| || | ||||| || ||| | || |||||| Sbjct 1930 AGCTGATCGACGCCTTGGCCCGTGTAGTTGGTGTCACAGTCGACATACTTTGCGCCAAAG 1871 Query 147292 TGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCC 147329 |||| ||| ||||||||||| || || || || ||||| Sbjct 1870 TGCCGCCATTGGAAGCCGTAGACAGGTCCGAGATCGCC 1833 Score = 82.4 bits (90), Expect = 9e-11 Identities = 120/170 (71%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 146917 TTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCC 146976 |||| |||||| || |||| | |||| ||||||||||| |||| | | ||| | || Sbjct 2358 TTCAAGGGCTCGACATGGTCGCGGTACACGTGCGCGTCGCCCATGCTCAACACGAGCTCG 2299 Query 146977 CCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATG 147036 || | || | | || || || |||||||||| || | || | |||||||| ||| Sbjct 2298 CCGGCCTCGCAGTCCGTGACCTGTGCCACCATGTGCGTCAAGAGAGCATAGCTGGCAATG 2239 Query 147037 TTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCA 147086 ||||| || || || || |||| || | || | ||||||| |||||| Sbjct 2238 TTGAAAGGAACGCCGAGTCCCAAATCGCAGGAGCGTTGGTACATCTGGCA 2189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583466936083200