Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20caries_20[genbank_20GCA_5F001645005.1_202016-05-16] 2,888 sequences; 29,540,861 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq2114 116 9e-21 seq2456 113 1e-19 seq2269 107 4e-18 seq580 107 4e-18 >seq2114 Length=91084 Score = 116 bits (128), Expect = 9e-21 Identities = 157/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| | || || |||||||| || ||||||||||| || | | ||| | Sbjct 18431 GAGACGGAGGACCAAGTGGAGCGTAGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACG 18490 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || ||||| || || ||||||||||| || | ||| ||||||| | || || || Sbjct 18491 GCCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGGGGAATGCCCTC 18550 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 || || || || || |||||| | || | | |||||||| || ||||| || || Sbjct 18551 TTTGTCCTGGATCTTGGTCTTGACATTGTCAATGGTGTCTGAAGATTCGACTTCGAGCGT 18610 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| || || ||||| ||||||| |||||| Sbjct 18611 GATCGTCTTGCCAGTCAGGGTCTTGACGAAGATCTGCAT 18649 Score = 114 bits (126), Expect = 3e-20 Identities = 155/214 (72%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| | || || || ||||| || ||||||||||| |||| | || | || || Sbjct 23135 AGGACCAAGTGGAGTGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGACCGTCC 23076 Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010 || || ||||| ||||||||||| || | || ||||||| || || || ||||| | Sbjct 23075 TCAAGCTGCTTT--CCGGCGAAGATGAGACGTTGTTGGTCCGGCGGAATGCCCTCCTTGT 23018 Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070 | || || ||| |||||| | || | | |||||||| ||| || || || || || | Sbjct 23017 CCTGGATCTTTGTCTTGACATTGTCAATGGTGTCTGAAGACTCGACCTCGAGGGTGATGG 22958 Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | ||||| || || ||||| ||||||| |||||| Sbjct 22957 TCTTGCCGGTCAGCGTCTTGACGAAGATCTGCAT 22924 Score = 107 bits (118), Expect = 4e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| | || || || ||||| |||||||||||||| || | | ||| | || ||| Sbjct 23363 AGGACCAAGTGGAGTGTCGACTCCTTTTGGATGTTGTAGTCCGAAAGAGTACGGCCGTCT 23304 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||| ||||| | | ||| ||||||| | || || ||||| || Sbjct 23303 TCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCC 23244 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || ||| |||||| | || | | |||||||| || || || || || || || Sbjct 23243 TGGATCTTTGTCTTGACATTGTCGATGGTGTCTGAAGATTCAACCTCGAGGGTGATGGTC 23184 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || || ||||| ||||||| |||||| Sbjct 23183 TTGCCGGTCAGCGTCTTGACGAAGATCTGCAT 23152 Score = 100 bits (110), Expect = 7e-16 Identities = 147/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| | || ||||| ||||| |||||||||||||| |||| | || | Sbjct 18659 GAGACGGAGGACCAAGTGGAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAGAGCGTGCG 18718 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || || || || || ||||| ||||| || | || ||||||| | || || || Sbjct 18719 ACCGTCCTCAAGCTGCTTGCCGGCAAAGATCAGACGTTGTTGGTCCGGAGGAATGCCCTC 18778 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || || |||||| | || | | ||||||| ||| || || || || Sbjct 18779 CTTGTCCTGGATCTTGGTCTTGACATTGTCGATGGTGTCTGAGGACTCGACCTCGAGGGT 18838 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACG 152093 ||| || ||||| || |||||||| ||| Sbjct 18839 AATGGTCTTGCCAGTAAGAGTCTTAACG 18866 Score = 100 bits (110), Expect = 7e-16 Identities = 145/203 (71%), Gaps = 4/203 (2%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| | || || || ||||| |||||||||||||| |||| | || | ||||| Sbjct 22907 AGGACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCC 22848 Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010 || || ||||| ||||||||||| || | ||| ||||||| | ||| || ||||| | Sbjct 22847 TCAAGCTGCTTT--CCGGCGAAGATGAGACGCTGTTGGTCCGGAGGGATACCCTCCTTGT 22790 Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070 | || || || ||||| | || | | | ||||| ||| || || || || || | Sbjct 22789 CCTGGATCTTGGTCTTGACGTTGTCGATGGTATCTGAGGACTCGACCTCGAGGGTGATGG 22730 Query 152071 TTTTGCCCGTGAGAGTCTTCACG 152093 | ||||| || |||||||| ||| Sbjct 22729 TCTTGCCGGTAAGAGTCTTAACG 22707 >seq2456 Length=10261 Score = 113 bits (124), Expect = 1e-19 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| |||||||| || ||| || ||||||||||| ||| | || | || || Sbjct 1109 AGGACCAGATGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCGTCCGTCC 1168 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || ||| ||||| ||||| |||| ||||||||||| | ||| || ||||| || Sbjct 1169 TCGAGCTGTTTTCCGGCAAAGATGAGCCGCTGCTGGTCCGGGGGGATCCCCTCCTTGTCC 1228 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || ||||| | || | | |||| || ||| || || || || || || Sbjct 1229 TGGATCTTGGTCTTGACGTTGTCGATGGTGTCGGAGGACTCCACCTCGAGGGTGATCGTC 1288 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 ||||| ||||| ||||| ||||||| |||||| || Sbjct 1289 TTGCCGGTGAGGGTCTTGACGAAGATCTGCATCTT 1323 >seq2269 Length=80277 Score = 107 bits (118), Expect = 4e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| || || || || || || || ||||||||||| || | | |||| || ||| Sbjct 52629 AGGACGAGGTGCAGGGTCGATTCCTTCTGGATGTTGTAGTCCGACAGCGTTCGGCCGTCT 52570 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||| ||||| || | ||| ||||||| | ||| || ||||| ||| Sbjct 52569 TCGAGCTGCTTGCCGGCAAAGATGAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCT 52510 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || ||||| | || | |||| || ||| || || || || || || Sbjct 52509 TGGATCTTGGTCTTGACGTTGTCAATCGTGTCGGATGACTCCACCTCGAGGGTGATCGTC 52450 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| |||||||||||||| |||| |||||| Sbjct 52449 TTGCCTGTGAGAGTCTTCACAAAGATCTGCAT 52418 >seq580 Length=47424 Score = 107 bits (118), Expect = 4e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || || || || || ||||| || ||||||||||| || | | ||| | || || Sbjct 27746 AGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCGTCC 27687 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||||||||| || | ||||||||||| | |||||| ||||| || Sbjct 27686 TCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGGATTCCCTCCTTGTCC 27627 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || ||||| | || | |||| ||| ||| || || || || || || Sbjct 27626 TGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGAAGACTCCACCTCGAGGGTGATCGTC 27567 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || |||||||| ||||| ||||| | |||||| Sbjct 27566 TTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 27535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153778105745848