Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20controversa_20[genbank_20GCA_5F001645045.1_202016-05-16] 3,586 sequences; 28,841,097 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq1768 89.7 1e-12 >seq1768 Length=22925 Score = 89.7 bits (98), Expect = 1e-12 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 319804 TCGGACCCGTCGAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAAC 319863 || || |||||||||||||| || ||||| || | | || | || ||||| Sbjct 8869 TCAGAGCCGTCGAGATCGTGCTCGACGTACCAGGTGCGGACCTCGTCGGGGGAAGGGAAA 8928 Query 319864 CCTTCAAGCTGGCCGTTCACAATAGCGCGCATCAGGGTTGATTTACCCGCCCCGTTTGGC 319923 || || | ||||||||| || |||||||| || || || || || | ||||| | Sbjct 8929 CCCTCGACTTGGCCGTTCTGGATGGCGCGCATGAGAGTGGACTTGCCGGAACCGTTGCGG 8988 Query 319924 CCACACAGACCGTAGCGGTTTCCGCGTTTCAGGTTGAACCGCGTGTTGTTCAGAAGAATT 319983 ||||| ||||||||||||| || || || ||| || | ||||||| ||||| Sbjct 8989 CCACAGAGACCGTAGCGGTGGCCACGCTTGAGGCGGAGGGTAGCAGTGTTCAGGAGAATC 9048 Query 319984 TTTCCACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 320030 || |||| || || ||||| || | ||| | |||| |||||||| Sbjct 9049 TTGGCACCGTAGGCGAGAGAGAACTGACAGTTGCACAAGTCCTCACC 9095 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057775397615180