Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20controversa_20[genbank_20GCA_5F001645045.1_202016-05-16] 3,586 sequences; 28,841,097 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq2057 168 7e-37 >seq2057 Length=22280 Score = 168 bits (186), Expect = 7e-37 Identities = 467/704 (66%), Gaps = 24/704 (3%) Strand=Plus/Plus Query 16700 AAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCCATGAAATCAAAAGGATTAGTAGCT 16759 ||||||||||| || || | ||||| || ||||||||||| || || ||||| || || Sbjct 16153 AAAAAGTTAGTCTTTCCTTGCAGAGAGATGTTCTCCATGAAGTCGAAGGGATTTGTCGC- 16211 Query 16760 GAAAATATT--TTAGAGTACCCCAGTTCGGCGATTAATCTATCCGCTACAAATTCTATAT 16817 | || | || || || || || | | | || || || ||||| || || | Sbjct 16212 -ATTGTAGTGCTTCTCGTTGCCGAGGGCGACCAGCAGTCGGTCGGCGACAAACTCGATGT 16270 Query 16818 ATTGGCACATTAATTCGCAGTTCATTCCTATAAGACGTACC-GGAAGAGCTTCCGTCAAA 16876 |||||| ||| | | |||||| || || | | | || || || || || || | Sbjct 16271 ATTGGCTCATCAGACGGGCGTTCATGCCGATCA-ATGAACATGGCAGCGCATCAGTGAGG 16329 Query 16877 AATCGTTGCTCTATAACAACCGCTTCCTTAATAATACTAGCAACTCGTTCCTCGGACGGT 16936 || |||||| || || ||||| ||| || | |||| || |||| | ||| Sbjct 16330 AAAGCTTGCTCGATGGTGACAGCTTCGCCAATGATGC--GCAAGACGA-CCTCAG--GGT 16384 Query 16937 GTATGT-----TTAAGATGTTTAAACATCAGACATGCGAAATCGCAATGTAATCCCTCGT 16991 || | || ||||| | || | || || || || ||| || | ||||||| Sbjct 16385 GTGGGCGCTTCTTGAGATGACTGAAGAGTAGGCACGCAAAGTCGGTGTGCAGACCCTCGT 16444 Query 16992 CTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACC 17051 ||| |||||| || ||||| || || || | |||||||| || || ||||| | || Sbjct 16445 CTCGGCTGATGAGCTCGTTGGAGAACGTGAGGCCGGGCATGAGACCGCGCTTCTTGAGCC 16504 Query 17052 AAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTA 17111 | || || | ||| || |||||||| ||||| || ||||| |||| || || ||||| | Sbjct 16505 AGAAGATGGAGGCAAAGGACCCAGAGAAGAAGATGCCCTCCACGGCGGCGAAGGCGATCA 16564 Query 17112 ATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTCTGCA---CCCACTCGGCTT 17168 |||| || || | |||| || ||| ||||| | ||| |||||||||| | Sbjct 16565 ATCGCTCAGCAAAGGTCGATTCGGTGTCGTTGATCCA---CCGCATGGCCCACTCGGCCT 16621 Query 17169 TTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAATTTCTCTTTTTCCTGTAGGT 17228 ||||||| | | | || || || ||||| | ||| | | ||| || ||| ||| Sbjct 16622 TTTGCTTGACGACAGGGATGGTCTCCATGGCATCAAAGAGGTACTCGCGTTGCTGAGGGT 16681 Query 17229 CGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTA 17288 || || || || |||||||| || ||| | || ||||| ||||||||||| | Sbjct 16682 CGCGAATGTATGTGTCGATGAGCAGAGAGTATGTCTCCGAGTGAATGTTCTCCATCATGA 16741 Query 17289 TCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCC-ACGTAGAATCGTTCC 17347 |||| || ||||| |||||||| || || ||| ||| || ||| | || || || || Sbjct 16742 TCTGGAAGCCGTAGAAGCATCGAGCCTCTGCTGCTTGCACCTCCGAACTA-AACCGCTCG 16800 Query 17348 GCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGC 17391 | || || ||||| || || ||||| || ||||| || || Sbjct 16801 ACGAGGTTCTCGTTGACAATACCGTCTGATGCTGCGAAGAAGGC 16844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517522401018480