Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20controversa_20[genbank_20GCA_5F001645045.1_202016-05-16] 3,586 sequences; 28,841,097 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq1466 107 2e-18 seq3524 93.3 5e-14 >seq1466 Length=3011 Score = 107 bits (118), Expect = 2e-18 Identities = 127/172 (74%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 145680 CTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTC 145739 ||||| |||||| || |||| | |||| ||||||||||| |||| | | || || Sbjct 2360 CTTCAAGGGCTCGACATGGTCGCGGTACACGTGCGCGTCGCCCATGCTCAACACGAGCTC 2301 Query 145740 CCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTAT 145799 |||| |||| | |||||| || || ||||||| |||| || | |||||||| || Sbjct 2300 GCCGGCCTCGCAGTCCGTGACCTGTGCCACCATGTGCGTCAAGAGAGCATAGCTGGCAAT 2241 Query 145800 GTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAG 145851 |||||| || || || || |||| || | ||||||||||||| ||||||| Sbjct 2240 GTTGAAAGGAACGCCGAGTCCCAAATCGCAGGAGCGCTGGTACATCTGGCAG 2189 >seq3524 Length=9252 Score = 93.3 bits (102), Expect = 5e-14 Identities = 123/171 (72%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 145681 TTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCC 145740 |||| |||||| || || | | |||| ||||||||||| |||| | | || || Sbjct 398 TTCAAGGGCTCGACATGATCGCGGTACACGTGCGCGTCGCCCATGCTCAACACGAGCTCG 339 Query 145741 CCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATG 145800 |||| |||| | ||||| || || ||||||| |||| || | |||||||| ||| Sbjct 338 CCGGCCTCGCAGTTCGTGACCTGTGCCACCATGTGCGTCAAGAGAGCATAGCTGGCAATG 279 Query 145801 TTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAG 145851 ||||| || || || || |||| || | ||||| ||||||| ||||||| Sbjct 278 TTGAAAGGAACGCCGAGTCCCAAATCGCAGGAGCGTTGGTACATCTGGCAG 228 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590050349807440