Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20controversa_20[genbank_20GCA_5F001645045.1_202016-05-16] 3,586 sequences; 28,841,097 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq2057 154 2e-32 seq2146 129 8e-25 >seq2057 Length=22280 Score = 154 bits (170), Expect = 2e-32 Identities = 371/557 (67%), Gaps = 6/557 (1%) Strand=Plus/Plus Query 36158 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 36217 || || || ||| ||| ||||||||||||| || || | |||||||| |||||||| Sbjct 16417 CACGCAAAGTCGGTGTGCAGACCCTCGTCTCGGCTGATGAGCTCGTTGGAGAACGTGAGG 16476 Query 36218 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 36277 |||||||| || || ||||| || ||||| || ||||| ||||| || ||||| ||||| Sbjct 16477 CCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGACCCAGAGAAGAAG 16536 Query 36278 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA-ACCG--GCACTGTCATGT 36334 || || || || || || ||||| || | || ||| || | || | |||| | Sbjct 16537 ATGCCCTCCACGGCGGCGAAGGCGATCAATCGCTCAGCAAAGGTCGATTCGGTGTCGTTG 16596 Query 36335 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTA 36394 |||||| ||||| |||||||| | || || ||| || ||||| || |||| | Sbjct 16597 ATCCACCGCATGGCCCACTCGGCCTTTTGCTTGACGACAGGGATGGTCTCCATGGCATCA 16656 Query 36395 AAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATT 36454 ||||| || | || | | || || ||||| || || | ||| || | Sbjct 16657 AAGAGGTACTCGCGTTGCTGAGGGTCGCGAATGTATGTGTCGATGAGCAGAGAGTATGTC 16716 Query 36455 TCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 36514 ||||| |||||||| || || || || || |||||||| |||| |||||| | Sbjct 16717 TCCGAGTGAATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGAGCCTCTGCTGCT 16776 Query 36515 TGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCA 36574 || || || | || ||| || || | | || || || || || ||||| ||||| Sbjct 16777 TGCACCTCCGAACTAAACCGCTCGACGAGGTTCTCGTTGACAATACCGTCTGATGCTGCG 16836 Query 36575 AAAAACGCCAATACATGTTTTATAAAATATTTTTCGTT-TGGTGTTAGT--TTATTCCAA 36631 || || || | || || | ||||| | || || | || | | || | ||| Sbjct 16837 AAGAAGGCGAGGACGTGGCTGATAAAGTGACGCTCATTGTCGTTCAACTTGTTGTCCCAG 16896 Query 36632 TCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTT 36691 || | || || || || | || | || || | ||||| || |||||||||||||| Sbjct 16897 TCGTGCATGTCCTTGGAAAGGTCGATCTCCTCAGCAGTCCAGAACGATGCCTCTGCCTTC 16956 Query 36692 TTATACATATTCCAGAT 36708 || ||||| | |||||| Sbjct 16957 TTGTACATTTGCCAGAT 16973 >seq2146 Length=21837 Score = 129 bits (142), Expect = 8e-25 Identities = 419/648 (65%), Gaps = 2/648 (0%) Strand=Plus/Minus Query 66012 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 66071 || || || ||| | || ||||| | |||||||||||||| | | ||||| ||||| Sbjct 16176 CCGGGGCACTCAGCGGGGCACATGAGCGACCACTCTCCGTTCTGTTCGACTCGCTTCATG 16117 Query 66072 AAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCT 66131 || | || ||||||||||| || || | || | || | | ||||| || || Sbjct 16116 AACAAGTCGGGAATCCAAAGGGCGTAGAAGAGCTCACGGGCGCGAACCTCCTCCTTGCCG 16057 Query 66132 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATG 66191 ||||| | || ||||||||| | | | || | ||||| || || | ||| ||| Sbjct 16056 TGGTTCTTCCTGAGGTCGAGGAACTCGAAGACGTCCGAGTGCCAAGGCTCAATGTAGATG 15997 Query 66192 GCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 66251 || | | | || || || ||||| || ||||| || | ||| | ||||||||| || | Sbjct 15996 GCAAAAGCCCCCGGTCGCTTGTTGCCACCCTGGTCGACGTAGCGAGCGGTGTTGTTGAAG 15937 Query 66252 ACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCA 66311 |||| | ||| |||| ||| || ||||| || ||||| || | || || || Sbjct 15936 ACTCGAAGCATGGGAACAATGCCGTTGGAGACGCCGTTGGTTCCAGCAATGTAAGAGCCG 15877 Query 66312 CTTGCACGAATATTACTAATTGAT-AGACCTATTCCCCCTGCCATTTTAGAGATTAATGC 66370 | | || || | | | || | || || || || || ||| | || ||| | || Sbjct 15876 GTGCCTCGGAT-GCAGTGAATGTTGAGCCCGATGCCACCGGCCGTCTTGCTGATCATGGC 15818 Query 66371 GCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAA 66430 ||| || | || || |||||||| || || |||||| |||| | | || || Sbjct 15817 GCAAGTCTTGAGGGTGTCGTAGATGCCATCGATGGAGTCATCCTTCATCGTGACCAGGAA 15758 Query 66431 ACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGT 66490 ||| ||||| ||| | ||||| ||||| || | ||| || || ||||| || Sbjct 15757 GCAGGATGACATCTGGGGGTTGGGTGTTCCGGCATTGAAGAGGGTGGGCGAGGCGTGGGT 15698 Query 66491 AAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATG 66550 || | || || || | || ||||| || || || || ||| || |||| || Sbjct 15697 GAAGTACTTCTCCGACATGAGGTTGTAAGTGTCGATGGCCTGGTCAATGTCCCGCCCGTG 15638 Query 66551 AATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTAT 66610 ||| || || ||||| ||||| | ||| || || || || || ||| |||| ||| || Sbjct 15637 AATGCCGACGGCGACTCGCATGAGCATATGTTGCGGCCTCTCGGCGACCTTGCCGTTAAT 15578 Query 66611 TTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 66658 || || || || || | ||| || || || || ||||| || Sbjct 15577 GCGCAGCAGATAAGAGCGCTCGAGAGTCTTGAAGCCGAAGTAGTTCTA 15530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658143297404240