Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20controversa_20[genbank_20GCA_5F001645045.1_202016-05-16] 3,586 sequences; 28,841,097 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq2057 194 2e-44 seq2146 152 7e-32 >seq2057 Length=22280 Score = 194 bits (214), Expect = 2e-44 Identities = 379/557 (68%), Gaps = 6/557 (1%) Strand=Plus/Plus Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 || || || ||| ||||||||||||||||| || || || |||||||| |||||||| Sbjct 16417 CACGCAAAGTCGGTGTGCAGACCCTCGTCTCGGCTGATGAGCTCGTTGGAGAACGTGAGG 16476 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079 |||||||| || || ||||| || ||||| || ||||| ||||| |||||||| |||||| Sbjct 16477 CCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGACCCAGAGAAGAAG 16536 Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CGCTGTCATGT 50136 || || || || ||||| ||||| | | || ||| || | | | || |||| | Sbjct 16537 ATGCCCTCCACGGCGGCGAAGGCGATCAATCGCTCAGCAAAGGTCGATTCGGTGTCGTTG 16596 Query 50137 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 50196 |||||| ||||| |||||||| | || || ||| || || || ||||||| | Sbjct 16597 ATCCACCGCATGGCCCACTCGGCCTTTTGCTTGACGACAGGGATGGTCTCCATGGCATCA 16656 Query 50197 AAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATT 50256 ||||| || | || | | || || || || ||||| | ||| || | Sbjct 16657 AAGAGGTACTCGCGTTGCTGAGGGTCGCGAATGTATGTGTCGATGAGCAGAGAGTATGTC 16716 Query 50257 TCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 50316 ||||| |||||||| || || ||||| || |||||||| |||| |||||| | Sbjct 16717 TCCGAGTGAATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGAGCCTCTGCTGCT 16776 Query 50317 TGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCA 50376 ||||| || | || ||| || || | | || || || || || ||||| ||||| Sbjct 16777 TGCACCTCCGAACTAAACCGCTCGACGAGGTTCTCGTTGACAATACCGTCTGATGCTGCG 16836 Query 50377 AAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTG-GGTGTTAGT--TTATTCCAA 50433 || || || | || || | ||||| || || ||| || | | || | ||| Sbjct 16837 AAGAAGGCGAGGACGTGGCTGATAAAGTGACGCTCATTGTCGTTCAACTTGTTGTCCCAG 16896 Query 50434 TCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTT 50493 || | || || || || | || | || || | ||||| || |||||||||||||| Sbjct 16897 TCGTGCATGTCCTTGGAAAGGTCGATCTCCTCAGCAGTCCAGAACGATGCCTCTGCCTTC 16956 Query 50494 TTATACATATTCCAGAT 50510 || ||||| | |||||| Sbjct 16957 TTGTACATTTGCCAGAT 16973 >seq2146 Length=21837 Score = 152 bits (168), Expect = 7e-32 Identities = 442/678 (65%), Gaps = 2/678 (0%) Strand=Plus/Minus Query 79861 TCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGAC 79920 ||||| || || || | || ||| | | || || || || | || ||||| | |||| Sbjct 16206 TCGAATTCCTCACCATAGACGTCGGCAAGACCGGGGCACTCAGCGGGGCACATGAGCGAC 16147 Query 79921 CACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 79980 |||||||| | | | ||||| ||||| || | || ||||||||||| || || Sbjct 16146 CACTCTCCGTTCTGTTCGACTCGCTTCATGAACAAGTCGGGAATCCAAAGGGCGTAGAAG 16087 Query 79981 AGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 80040 || || | || | | |||||| || || ||||| | || ||||||||| | | Sbjct 16086 AGCTCACGGGCGCGAACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCGAGGAACTCGAAG 16027 Query 80041 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCC 80100 | || || ||||| || || | ||| ||||| | | | |||||||| ||||| || ||| Sbjct 16026 ACGTCCGAGTGCCAAGGCTCAATGTAGATGGCAAAAGCCCCCGGTCGCTTGTTGCCACCC 15967 Query 80101 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 80160 || || | ||| | ||||||||| || | |||| | ||| |||| ||| || ||||| Sbjct 15966 TGGTCGACGTAGCGAGCGGTGTTGTTGAAGACTCGAAGCATGGGAACAATGCCGTTGGAG 15907 Query 80161 GTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGAT-AGACC 80219 || ||||| || | || || || || | || || | | | || | || || Sbjct 15906 ACGCCGTTGGTTCCAGCAATGTAAGAGCCGGTGCCTCGGAT-GCAGTGAATGTTGAGCCC 15848 Query 80220 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTC 80279 || || || ||| | || ||| | ||||| || | || || |||||||| || Sbjct 15847 GATGCCACCGGCCGTCTTGCTGATCATGGCGCAAGTCTTGAGGGTGTCGTAGATGCCATC 15788 Query 80280 TATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCC 80339 ||| ||||| |||| | | || || ||| ||||| ||| | ||||| Sbjct 15787 GATGGAGTCATCCTTCATCGTGACCAGGAAGCAGGATGACATCTGGGGGTTGGGTGTTCC 15728 Query 80340 CGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGT 80399 ||||| || | ||| || || ||||| || || | || || |||| || ||||| || Sbjct 15727 GGCATTGAAGAGGGTGGGCGAGGCGTGGGTGAAGTACTTCTCCGACATGAGGTTGTAAGT 15668 Query 80400 CTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTG 80459 || || || || || |||| ||||| || || ||||| ||||| | ||| || Sbjct 15667 GTCGATGGCCTGGTCAATGTCCCGCCCGTGAATGCCGACGGCGACTCGCATGAGCATATG 15608 Query 80460 CTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTT 80519 || || || || ||| |||| || || || || ||||| || | ||| || Sbjct 15607 TTGCGGCCTCTCGGCGACCTTGCCGTTAATGCGCAGCAGATAAGAGCGCTCGAGAGTCTT 15548 Query 80520 AAAACCAAAATAGTTGTA 80537 || || || ||||| || Sbjct 15547 GAAGCCGAAGTAGTTCTA 15530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718236603601040